RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 SMOC1Q9H4F8 434 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 MYH16Q9H6N6 1097 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 VEZTQ9HBM0 779 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 DSEQ9UL01 958 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 PCDHA5Q9Y5H7 936 aa7.99□□□□□ -1.13
VIM-207ENST00000495528 TCRBV5S2A0A599 114 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 TCRBV5S4A2TA0A5A2 114 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 NFIBO00712 420 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 GSTA4O15217 222 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 PLIN1O60240 522 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 BUB1BO60566 1050 aaPredicted RBP7.98□□□□□ -1.13
VIM-207ENST00000495528 ASLP04424 464 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 C1QTNF9P0C862 333 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 EN2P19622 333 aaPredicted RBP7.98□□□□□ -1.13
VIM-207ENST00000495528 RBM5P52756 815 aaKnown RBP eCLIP7.98□□□□□ -1.13
VIM-207ENST00000495528 GYS2P54840 703 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 JAM2P57087 298 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 CRHR2Q13324 411 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 ZNF124Q15973 351 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 PLEKHG4Q58EX7 1191 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 EPHA10Q5JZY3 1008 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 ZNF804AQ7Z570 1209 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 PTRH1Q86Y79 214 aaKnown RBP7.98□□□□□ -1.13
VIM-207ENST00000495528 ANKRD13AQ8IZ07 590 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 POU5F2Q8N7G0 328 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 GCC1Q96CN9 775 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 ERO1AQ96HE7 468 aa7.98□□□□□ -1.13
VIM-207ENST00000495528 COL1A1P02452 1464 aaPredicted RBP7.98□□□□□ -1.13
VIM-207ENST00000495528 ZNF646O15015 1829 aaPredicted RBP7.97□□□□□ -1.13
VIM-207ENST00000495528 TCAF2A6NFQ2 919 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 WNT9AO14904 365 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 N4BP3O15049 544 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 JMJD7P0C870 316 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 NCAM1P13591 858 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 ATF2P15336 505 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 STAT5AP42229 794 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 SP3Q02447 781 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 TUSC3Q13454 348 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 HABP4Q5JVS0 413 aaKnown RBP7.97□□□□□ -1.13
VIM-207ENST00000495528 BEND3Q5T5X7 828 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 LCE3BQ5TA77 95 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 OTUD7BQ6GQQ9 843 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 LMBR1LQ6UX01 489 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 ETV3LQ6ZN32 361 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 EP400NLQ6ZTU2 488 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 IGDCC3Q8IVU1 814 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 FAM26EQ8N5C1 309 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
VIM-207ENST00000495528 SH3RF2Q8TEC5 729 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 OPTNQ96CV9 577 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 TDRD3Q9H7E2 651 aaKnown RBP7.97□□□□□ -1.13
VIM-207ENST00000495528 SAMD15Q9P1V8 674 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 MAGEC2Q9UBF1 373 aaPredicted RBP7.97□□□□□ -1.13
VIM-207ENST00000495528 ASH2LQ9UBL3 628 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 FAN1Q9Y2M0 1017 aa7.97□□□□□ -1.13
VIM-207ENST00000495528 CLSTN1O94985 981 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 AMY2AP04746 511 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 PFKLP17858 780 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 AMY2BP19961 511 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 TXKP42681 527 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 LIMS1P48059 325 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 NEK4P51957 841 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 TARBP2Q15633 366 aaKnown RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 GPR19Q15760 415 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 PKN1Q16512 942 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 CCDC57Q2TAC2 916 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 PIK3R6Q5UE93 754 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 ZCCHC8Q6NZY4 707 aaKnown RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 CD300LDQ6UXZ3 194 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 LDHAL6AQ6ZMR3 332 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 DDX53Q86TM3 631 aaKnown RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 TDRD7Q8NHU6 1098 aaKnown RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 CLEC4DQ8WXI8 215 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 PPP1R16BQ96T49 567 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 CELF4Q9BZC1 486 aaKnown RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 SLKQ9H2G2 1235 aaPredicted RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 ZNF70Q9UC06 446 aaPredicted RBP7.96□□□□□ -1.14
VIM-207ENST00000495528 TELO2Q9Y4R8 837 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 IL16Q14005 1332 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 FAM205AQ6ZU69 1335 aa7.96□□□□□ -1.14
VIM-207ENST00000495528 SPEF2Q9C093 1822 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 B4E1Z4 1266 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 TCP10L2B9ZVM9 353 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 M0R2C6 588 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 GLRX3O76003 335 aaKnown RBP7.95□□□□□ -1.14
VIM-207ENST00000495528 KRT1P04264 644 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 GLDCP23378 1020 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 GYG1P46976 350 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 EXOSC9Q06265 439 aaKnown RBP7.95□□□□□ -1.14
VIM-207ENST00000495528 TAF7LQ5H9L4 462 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 MFSD14BQ5SR56 506 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 UBE2R2Q712K3 238 aaPredicted RBP7.95□□□□□ -1.14
VIM-207ENST00000495528 KCTD1Q719H9 257 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 LRRTM3Q86VH5 581 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 PHOSPHO1Q8TCT1 267 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 BRI3BPQ8WY22 251 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 MFSD3Q96ES6 412 aa7.95□□□□□ -1.14
VIM-207ENST00000495528 DDX11Q96FC9 970 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms