RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ARNTL2Q8WYA1 636 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 TCHPQ9BT92 498 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 HAPLN2Q9GZV7 340 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 CDT1Q9H211 546 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 RSAD1Q9HA92 442 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 TYW1Q9NV66 732 aaKnown RBP21.31■■□□□ 1
HDAC4-212ENST00000495497 ANKFY1Q9P2R3 1169 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 PARP2Q9UGN5 583 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 TMEM265A0A087WTH1 108 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 PVALEFA0A1B0GWK0 134 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 EPOPA6NHQ4 379 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 TISP43B9A030 160 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 ANKRD63C9JTQ0 380 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 RFXAPO00287 272 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 PRPF6O94906 941 aaKnown RBP21.3■■□□□ 1
HDAC4-212ENST00000495497 LINC00271P0C7V0 271 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 LIG4P49917 911 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 OSTNP61366 133 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 EHHADHQ08426 723 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 DCAF4L1Q3SXM0 396 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 KMT5BQ4FZB7 885 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 L1TD1Q5T7N2 865 aaKnown RBP21.3■■□□□ 1
HDAC4-212ENST00000495497 SLC39A4Q6P5W5 647 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 MPZL3Q6UWV2 235 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 TGS1Q96RS0 853 aaKnown RBP21.3■■□□□ 1
HDAC4-212ENST00000495497 KLK14Q9P0G3 267 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 GDAQ9Y2T3 454 aa21.3■■□□□ 1
HDAC4-212ENST00000495497 HNRNPDLO14979 420 aaKnown RBP21.29■■□□□ 1
HDAC4-212ENST00000495497 TOM1L1O75674 476 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 RPN1P04843 607 aaKnown RBP21.29■■□□□ 1
HDAC4-212ENST00000495497 MATR3P43243 847 aaKnown RBP eCLIP21.29■■□□□ 1
HDAC4-212ENST00000495497 UBE2HP62256 183 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 DPYDQ12882 1025 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 PNOCQ13519 176 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 SEZ6Q53EL9 994 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 FAM26FQ5R3K3 315 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 GLB1LQ6UWU2 654 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 ZPBP2Q6X784 338 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 TMEM192Q8IY95 271 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 ZFP42Q96MM3 310 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 GAD1Q99259 594 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 CXCL16Q9H2A7 254 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 PRDM12Q9H4Q4 367 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 CWH43Q9H720 699 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 SLC39A2Q9NP94 309 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 MIOSQ9NXC5 875 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 PCDHB13Q9Y5F0 798 aa21.29■■□□□ 1
HDAC4-212ENST00000495497 CHD9Q3L8U1 2897 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 POMCP01189 267 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 PIGRP01833 764 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 SCP2P22307 547 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 MLH1P40692 756 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 ERVK-21P61565 698 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 NOMO2Q5JPE7 1267 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 SPOUT1Q5T280 376 aaKnown RBP21.28■■□□□ 1
HDAC4-212ENST00000495497 KANK3Q6NY19 840 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 THNSL1Q8IYQ7 743 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 ERCC4Q92889 916 aaPredicted RBP21.28■■□□□ 1
HDAC4-212ENST00000495497 HVCN1Q96D96 273 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 ACCSQ96QU6 501 aa21.28■■□□□ 1
HDAC4-212ENST00000495497 ARL5CA6NH57 179 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 CLDN3O15551 220 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 MYL1P05976 194 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 MCF2P10911 925 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 ABCD1P33897 745 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 CTNNB1P35222 781 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 MCL1Q07820 350 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 NOLC1Q14978 699 aaKnown RBP eCLIP21.27■■□□□ 1
HDAC4-212ENST00000495497 POSTNQ15063 836 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 EPC2Q52LR7 807 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 HACE1Q8IYU2 909 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 CLP1Q92989 425 aaKnown RBP21.27■■□□□ 1
HDAC4-212ENST00000495497 UBN1Q9NPG3 1134 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 EXOC1Q9NV70 894 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 TBC1D13Q9NVG8 400 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 GIT1Q9Y2X7 761 aa21.27■■□□□ 1
HDAC4-212ENST00000495497 RECQL4O94761 1208 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 HOXD13P35453 343 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 BMPR1AP36894 532 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 PBX3P40426 434 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 SCNN1GP51170 649 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 STK4Q13043 487 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 EPM2AIP1Q7L775 607 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-212ENST00000495497 APBB1IPQ7Z5R6 666 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-212ENST00000495497 ZNF280BQ86YH2 543 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 SYCP3Q8IZU3 236 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 LRRC43Q8N309 656 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 TIGD1Q96MW7 591 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 GUCD1Q96NT3 240 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 GBP3Q9H0R5 595 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 LMBRD1Q9NUN5 540 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 MTMR10Q9NXD2 777 aa21.26■□□□□ 0.99
HDAC4-212ENST00000495497 FNDC1Q4ZHG4 1894 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-212ENST00000495497 B4GALT3O60512 393 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 KINO60870 393 aaKnown RBP21.25■□□□□ 0.99
HDAC4-212ENST00000495497 GRM5P41594 1212 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 ALCAMQ13740 583 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 ZBTB41Q5SVQ8 909 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 NELFCDQ8IXH7 590 aa21.25■□□□□ 0.99
HDAC4-212ENST00000495497 GSTCDQ8NEC7 633 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms