RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZBTB33Q86T24 672 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 SYCP3Q8IZU3 236 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 FMR1NBQ8N0W7 255 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 TMEM87AQ8NBN3 555 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 KCNN1Q92952 543 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 CASD1Q96PB1 797 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 FAM193BQ96PV7 902 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 ACCSQ96QU6 501 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 FIZ1Q96SL8 496 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 NXF3Q9H4D5 531 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 EXOC1Q9NV70 894 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 KANSL3Q9P2N6 904 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 FNDC1Q4ZHG4 1894 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
CSNK1E-213ENST00000495232 GOLGA6L22H0YM25 854 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 OFD1O75665 1012 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 MCF2P10911 925 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 CTNNB1P35222 781 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 YARSP54577 528 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 ERVK-21P61565 698 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.293e-6■■□□□ 12.8
CSNK1E-213ENST00000495232 FAM26FQ5R3K3 315 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 MAP4K3Q8IVH8 894 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 TMEM192Q8IY95 271 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 CLP1Q92989 425 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 RPS6KC1Q96S38 1066 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 C17orf80Q9BSJ5 609 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 TMEM206Q9H813 350 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 RNF19AQ9NV58 838 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 SNTG2Q9NY99 539 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 GDAQ9Y2T3 454 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-213ENST00000495232 ARL5CA6NH57 179 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 MEIS3P2A8K0S8 358 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 NR1I2O75469 434 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 RPN1P04843 607 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 RB1P06400 928 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 MYBP10242 640 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 LAG3P18627 525 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 PROZP22891 400 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 MLH1P40692 756 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 PSMD2Q13200 908 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 GRIN2CQ14957 1233 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 POSTNQ15063 836 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 KYAT1Q16773 422 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 EPC2Q52LR7 807 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 THNSL1Q8IYQ7 743 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 HPS3Q969F9 1004 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 ZBTB45Q96K62 511 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 GAD1Q99259 594 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 GBP3Q9H0R5 595 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 CDT1Q9H211 546 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 PTPRHQ9HD43 1115 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 TOPORSQ9NS56 1045 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 CDH23Q9H251 3354 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 CHD7Q9P2D1 2997 aa13.22□□□□□ -0.29
CSNK1E-213ENST00000495232 RALGAPA2Q2PPJ7 1873 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 NLRC5Q86WI3 1866 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 CARNS1A5YM72 827 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 EIF3DO15371 548 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 PPP1R37O75864 691 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 RECQL4O94761 1208 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 SMC2O95347 1197 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 SLC34A2O95436 690 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 POMCP01189 267 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 PIGRP01833 764 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 BMPR1AP36894 532 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 GRM5P41594 1212 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 ALDH7A1P49419 539 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 CASP5P51878 434 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 OSTNP61366 133 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 MCL1Q07820 350 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 CLEC17AQ6ZS10 378 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 ENGASEQ8NFI3 743 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 C11orf84Q9BUA3 381 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 MSTO1Q9BUK6 570 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 STRA6Q9BX79 667 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 PLVAPQ9BX97 442 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 PRDM12Q9H4Q4 367 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 SLC39A2Q9NP94 309 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms