RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TBX3O15119 743 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 PI15O43692 258 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 USO1O60763 962 aaKnown RBP10.7□□□□□ -0.7
UBR4-216ENST00000494503 TADA2AO75478 443 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 RPL17P18621 184 aaKnown RBP10.7□□□□□ -0.7
UBR4-216ENST00000494503 AOC1P19801 751 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 ATP2B1P20020 1258 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 AXLP30530 894 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 NR5A1Q13285 461 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 TRIM29Q14134 588 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 ANGPT1Q15389 498 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 CEP57Q86XR8 500 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 COLGALT2Q8IYK4 626 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 FAM177A1Q8N128 213 aaPredicted RBP10.7□□□□□ -0.7
UBR4-216ENST00000494503 ASAP3Q8TDY4 903 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 HAS1Q92839 578 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 CCDC51Q96ER9 411 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 EIF2AK1Q9BQI3 630 aaKnown RBP10.7□□□□□ -0.7
UBR4-216ENST00000494503 RTP3Q9BQQ7 232 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 CSRNP2Q9H175 543 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 POLR3FQ9H1D9 316 aaPredicted RBP10.7□□□□□ -0.7
UBR4-216ENST00000494503 IGSF9Q9P2J2 1179 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 PCDHA12Q9UN75 941 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 POLIQ9UNA4 740 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 DOCK8Q8NF50 2099 aa10.7□□□□□ -0.7
UBR4-216ENST00000494503 VPS13AQ96RL7 3174 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 DOCK6Q96HP0 2047 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 STK36Q9NRP7 1315 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 A0A087WWV3 80 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 B4GALT5O43286 388 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 ARF4P18085 180 aaPredicted RBP10.69□□□□□ -0.7
UBR4-216ENST00000494503 NBL1P41271 181 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 TXKP42681 527 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 PTENP60484 403 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 MBTD1Q05BQ5 628 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 CAPSQ13938 189 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 USP41Q3LFD5 358 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
UBR4-216ENST00000494503 FUT10Q6P4F1 479 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 ADSSL1Q8N142 457 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 PIGOQ8TEQ8 1089 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 TM6SF1Q9BZW5 370 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 WDR6Q9NNW5 1121 aaKnown RBP10.69□□□□□ -0.7
UBR4-216ENST00000494503 CACNG4Q9UBN1 327 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 TPCN1Q9ULQ1 816 aa10.69□□□□□ -0.7
UBR4-216ENST00000494503 EP300Q09472 2414 aaPredicted RBP10.68□□□□□ -0.7
UBR4-216ENST00000494503 CASTOR2A6NHX0 329 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 TGM5O43548 720 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 NEMFO60524 1076 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 LILRB3O75022 631 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 N4BP1O75113 896 aaKnown RBP10.68□□□□□ -0.7
UBR4-216ENST00000494503 DGAT1O75907 488 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 DSG1Q02413 1049 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 GRIK3Q13003 919 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 PCBP1Q15365 356 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBR4-216ENST00000494503 LIN9Q5TKA1 542 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 SLC27A1Q6PCB7 646 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 PRSS55Q6UWB4 352 aaPredicted RBP10.68□□□□□ -0.7
UBR4-216ENST00000494503 ZBTB8OSQ8IWT0 167 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 CCDC105Q8IYK2 499 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 NECAB1Q8N987 351 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 DTWD2Q8NBA8 298 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 MYADMQ96S97 322 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 GPR62Q9BZJ7 368 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 TTC12Q9H892 705 aaPredicted RBP10.68□□□□□ -0.7
UBR4-216ENST00000494503 TBC1D17Q9HA65 648 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 XPNPEP1Q9NQW7 623 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.7
UBR4-216ENST00000494503 MIOSQ9NXC5 875 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 ADAM28Q9UKQ2 775 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 GIT1Q9Y2X7 761 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 GVINP1Q7Z2Y8 2422 aa10.68□□□□□ -0.7
UBR4-216ENST00000494503 SF3B1O75533 1304 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■■■□ 24.9
UBR4-216ENST00000494503 MIA3Q5JRA6 1907 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 MYH15Q9Y2K3 1946 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 POTEMA6NI47 508 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 PROB1E7EW31 1015 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 PFKFB2O60825 505 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 SLITRK3O94933 977 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 DCNP07585 359 aaKnown RBP10.67□□□□□ -0.7
UBR4-216ENST00000494503 NPR3P17342 541 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 GLRA2P23416 452 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 CREMQ03060 361 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 DSC1Q08554 894 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 HSP90AA2PQ14568 343 aaPredicted RBP10.67□□□□□ -0.7
UBR4-216ENST00000494503 KIAA0319Q5VV43 1072 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 CMASQ8NFW8 434 aaPredicted RBP10.67□□□□□ -0.7
UBR4-216ENST00000494503 GPR152Q8TDT2 470 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 PLEKHA4Q9H4M7 779 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 GPRC5CQ9NQ84 441 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 ANKEF1Q9NU02 776 aa10.67□□□□□ -0.7
UBR4-216ENST00000494503 KRBA1A5PL33 1030 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 SRFP11831 508 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 FSHRP23945 695 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 MCM7P33993 719 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 RARRES1P49788 294 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 SPIRE1Q08AE8 756 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 ANKRD1Q15327 319 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 PSMD5Q16401 504 aa10.66□□□□□ -0.7
UBR4-216ENST00000494503 PPM1LQ5SGD2 360 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms