RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CEP112Q8N8E3 955 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 PPTC7Q8NI37 304 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 TAS1R2Q8TE23 839 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 ZNF516Q92618 1163 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 ZBTB10Q96DT7 871 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 KREMEN1Q96MU8 473 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 ERAP1Q9NZ08 941 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 PUF60Q9UHX1 559 aaKnown RBP17.9■□□□□ 0.46
ATG4B-225ENST00000494465 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 JRKLQ9Y4A0 524 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 SAR1BQ9Y6B6 198 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 ATP8B3O60423 1300 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 BUB1O43683 1085 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 DLATP10515 647 aaKnown RBP17.9■□□□□ 0.46
ATG4B-225ENST00000494465 ACOT2P49753 483 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 MXD4Q14582 209 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-225ENST00000494465 ZBTB41Q5SVQ8 909 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 EXOC8Q8IYI6 725 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 NPLOC4Q8TAT6 608 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 AFG1LQ8WV93 481 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 FAM84AQ96KN4 292 aa17.9■□□□□ 0.46
ATG4B-225ENST00000494465 BTNL10A8MVZ5 291 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 SRGAP2O75044 1071 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 EFNA5P52803 228 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 USP37Q86T82 979 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 FMNL3Q8IVF7 1028 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 FBXL13Q8NEE6 735 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 NOX5Q96PH1 765 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 CPA4Q9UI42 421 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 SRGAP2CP0DJJ0 459 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 CHMP4BP1P59074 171 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 ZPBP2Q6X784 338 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 VPS36Q86VN1 386 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 RNF149Q8NC42 400 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 HELQQ8TDG4 1101 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 VTI1AQ96AJ9 217 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 TINF2Q9BSI4 451 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.89■□□□□ 0.452e-6■■■■■ 96.1
ATG4B-225ENST00000494465 RAB20Q9NX57 234 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 SUCLA2Q9P2R7 463 aaPredicted RBP17.89■□□□□ 0.45
ATG4B-225ENST00000494465 ZSWIM8A7E2V4 1837 aa17.89■□□□□ 0.45
ATG4B-225ENST00000494465 PTPRJQ12913 1337 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 C22orf31O95567 290 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 GJB1P08034 283 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 CHADLQ6NUI6 762 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 GLYCTKQ8IVS8 523 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 ALS2CR12Q96Q35 445 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 JPH2Q9BR39 696 aaPredicted RBP17.88■□□□□ 0.45
ATG4B-225ENST00000494465 ANKFY1Q9P2R3 1169 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 SLC15A5A6NIM6 579 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 FAM189A1O60320 539 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 CCDC172P0C7W6 258 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 SMPD1P17405 629 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 PRPF4BQ13523 1007 aaKnown RBP17.88■□□□□ 0.45
ATG4B-225ENST00000494465 FBXO38Q6PIJ6 1188 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 PDCL2Q8N4E4 241 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 GOLGA1Q92805 767 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 C16orf70Q9BSU1 422 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 MSTO1Q9BUK6 570 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 EPC1Q9H2F5 836 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 PDE11AQ9HCR9 933 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 SNX12Q9UMY4 172 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 PCDHGC5Q9Y5F6 944 aa17.88■□□□□ 0.45
ATG4B-225ENST00000494465 ABLIM1O14639 778 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 INSRRP14616 1297 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 H2AFXP16104 143 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ZSCAN20P17040 1043 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 CLCN3P51790 818 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 TEX35Q5T0J7 233 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 EFCAB12Q6NXP0 572 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 RHPN2Q8IUC4 686 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 FAM71AQ8IYT1 594 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 U2AF1L4Q8WU68 220 aaKnown RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 SHC3Q92529 594 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 CNTNAP2Q9UHC6 1331 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 TULP1O00294 542 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ADCY6O43306 1168 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 LDHAP00338 332 aaKnown RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 C4BPAP04003 597 aaKnown RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ZNF286BP0CG31 522 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ACVR2BQ13705 512 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 DUSP28Q4G0W2 176 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ZNF484Q5JVG2 852 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 MORN1Q5T089 497 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 LMBRD2Q68DH5 695 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 PPM1KQ8N3J5 372 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 RABGGTAQ92696 567 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ELMO3Q96BJ8 720 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ACO2Q99798 780 aaKnown RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ABHD16BQ9H3Z7 469 aa17.87■□□□□ 0.45
ATG4B-225ENST00000494465 RBAKQ9NYW8 714 aaPredicted RBP17.87■□□□□ 0.45
ATG4B-225ENST00000494465 ZNF185O15231 689 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 HOXD8P13378 290 aaPredicted RBP17.86■□□□□ 0.45
ATG4B-225ENST00000494465 ZACNQ401N2 412 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 PALB2Q86YC2 1186 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 LINC01465Q8N7H1 131 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 SLC20A1Q8WUM9 679 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 TLR10Q9BXR5 811 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 MRPL4Q9BYD3 311 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms