RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 KRI1Q8N9T8 703 aaKnown RBP24.1■■□□□ 1.45
HPS3-207ENST00000494327 BCL7CQ8WUZ0 217 aaPredicted RBP24.1■■□□□ 1.45
HPS3-207ENST00000494327 IGSF21Q96ID5 467 aa24.1■■□□□ 1.45
HPS3-207ENST00000494327 ARHGAP28Q9P2N2 729 aa24.1■■□□□ 1.45
HPS3-207ENST00000494327 CARNS1A5YM72 827 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 NRP1O14786 923 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 PDIA4P13667 645 aaKnown RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 DDIT3P35638 169 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 OR1G1P47890 313 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 NASPP49321 788 aaPredicted RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 ADAM15Q13444 863 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 COL19A1Q14993 1142 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 CLUL1Q15846 466 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 CTC1Q2NKJ3 1217 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 TAS1R3Q7RTX0 852 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 VPS52Q8N1B4 723 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 LARP4BQ92615 738 aaKnown RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 RPS6KC1Q96S38 1066 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 REEP2Q9BRK0 252 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 TMEM175Q9BSA9 504 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 NTPCRQ9BSD7 190 aaKnown RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 PANK2Q9BZ23 570 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 ZHX3Q9H4I2 956 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 NGRNQ9NPE2 291 aaKnown RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 DAXXQ9UER7 740 aaPredicted RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 KCNG1Q9UIX4 513 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 PRG3Q9Y2Y8 225 aaPredicted RBP24.09■■□□□ 1.45
HPS3-207ENST00000494327 A0A0C4DFX4 3053 aa24.09■■□□□ 1.45
HPS3-207ENST00000494327 HIDE1A8MVS5 230 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 INPPL1O15357 1258 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 F13A1P00488 732 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 LTBRP36941 435 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 NDUFV1P49821 464 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 DLX2Q07687 328 aaPredicted RBP24.08■■□□□ 1.45
HPS3-207ENST00000494327 PKP1Q13835 747 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 DCAF4L1Q3SXM0 396 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 RRAGBQ5VZM2 374 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 LINC00301Q8NCQ3 95 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 SPIRE2Q8WWL2 714 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 UHRF1Q96T88 793 aaPredicted RBP24.08■■□□□ 1.45
HPS3-207ENST00000494327 ACO2Q99798 780 aaKnown RBP24.08■■□□□ 1.45
HPS3-207ENST00000494327 TARS2Q9BW92 718 aaKnown RBP24.08■■□□□ 1.45
HPS3-207ENST00000494327 MRPL4Q9BYD3 311 aaKnown RBP24.08■■□□□ 1.45
HPS3-207ENST00000494327 LARSQ9P2J5 1176 aaKnown RBP24.08■■□□□ 1.45
HPS3-207ENST00000494327 TNFSF13BQ9Y275 285 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 GDAQ9Y2T3 454 aa24.08■■□□□ 1.45
HPS3-207ENST00000494327 SPTLC2O15270 562 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 FAM13AO94988 1023 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 CXCL14O95715 111 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 STRN3Q13033 797 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 SMC1AQ14683 1233 aaKnown RBP24.07■■□□□ 1.44
HPS3-207ENST00000494327 BMS1Q14692 1282 aaKnown RBP24.07■■□□□ 1.44
HPS3-207ENST00000494327 PTCRAQ6ISU1 281 aaPredicted RBP24.07■■□□□ 1.44
HPS3-207ENST00000494327 ZBTB33Q86T24 672 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 DDX53Q86TM3 631 aaKnown RBP24.07■■□□□ 1.44
HPS3-207ENST00000494327 COLGALT2Q8IYK4 626 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 MYCT1Q8N699 235 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 EFHBQ8N7U6 833 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 GSTCDQ8NEC7 633 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 NECAB3Q96P71 396 aaPredicted RBP24.07■■□□□ 1.44
HPS3-207ENST00000494327 TCHPQ9BT92 498 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 ODF2LQ9ULJ1 636 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 ATG2AQ2TAZ0 1938 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 MYO7AQ13402 2215 aa24.07■■□□□ 1.44
HPS3-207ENST00000494327 NR1I2O75469 434 aa24.06■■□□□ 1.44
HPS3-207ENST00000494327 RECQL4O94761 1208 aa24.06■■□□□ 1.44
HPS3-207ENST00000494327 GIT2Q14161 759 aa24.06■■□□□ 1.44
HPS3-207ENST00000494327 DUSP6Q16828 381 aa24.06■■□□□ 1.44
HPS3-207ENST00000494327 APBB1IPQ7Z5R6 666 aaPredicted RBP24.06■■□□□ 1.44
HPS3-207ENST00000494327 TMEM161BQ8NDZ6 487 aa24.06■■□□□ 1.44
HPS3-207ENST00000494327 AUTS2Q8WXX7 1259 aa24.06■■□□□ 1.44
HPS3-207ENST00000494327 MORC2Q9Y6X9 1032 aaPredicted RBP24.06■■□□□ 1.44
HPS3-207ENST00000494327 TBX10O75333 385 aa24.05■■□□□ 1.44
HPS3-207ENST00000494327 RBM10P98175 930 aaKnown RBP24.05■■□□□ 1.44
HPS3-207ENST00000494327 DSC1Q08554 894 aa24.05■■□□□ 1.44
HPS3-207ENST00000494327 GRIK3Q13003 919 aa24.05■■□□□ 1.44
HPS3-207ENST00000494327 ZNF568Q3ZCX4 644 aa24.05■■□□□ 1.44
HPS3-207ENST00000494327 MRPL43Q8N983 215 aaKnown RBP24.05■■□□□ 1.44
HPS3-207ENST00000494327 TMEM87AQ8NBN3 555 aa24.05■■□□□ 1.44
HPS3-207ENST00000494327 CDCA3Q99618 268 aaPredicted RBP24.05■■□□□ 1.44
HPS3-207ENST00000494327 STK17AQ9UEE5 414 aa24.05■■□□□ 1.44
HPS3-207ENST00000494327 C2orf71A6NGG8 1288 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 TBCAO75347 108 aaKnown RBP24.04■■□□□ 1.44
HPS3-207ENST00000494327 MAPTP10636 758 aaKnown RBP24.04■■□□□ 1.44
HPS3-207ENST00000494327 HARSP12081 509 aaKnown RBP24.04■■□□□ 1.44
HPS3-207ENST00000494327 IL9P15248 144 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 OSTNP61366 133 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 LLGL2Q6P1M3 1020 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 DYMQ7RTS9 669 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 RABGGTAQ92696 567 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 VN1R3Q9BXE9 311 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 ZBP1Q9H171 429 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 CDT1Q9H211 546 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 CXCL16Q9H2A7 254 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 PARVGQ9HBI0 331 aa24.04■■□□□ 1.44
HPS3-207ENST00000494327 BARX2Q9UMQ3 279 aaPredicted RBP24.04■■□□□ 1.44
HPS3-207ENST00000494327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.03■■□□□ 1.44
HPS3-207ENST00000494327 H0YCG3 227 aa24.03■■□□□ 1.44
HPS3-207ENST00000494327 PPP6R2O75170 966 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms