RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CLIC6Q96NY7 704 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 IGFLR1Q9H665 355 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 STK39Q9UEW8 545 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 TNFSF13BQ9Y275 285 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 USP20Q9Y2K6 914 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 BRWD1Q9NSI6 2320 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 NPHP3-ACAD11A0A0J9YXS1 232 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 SFI1A8K8P3 1242 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 TXLNAP40222 546 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 SMTNP53814 917 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 ADAM15Q13444 863 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 MCM6Q14566 821 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 DUSP6Q16828 381 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 PUS10Q3MIT2 529 aaKnown RBP24.89■■□□□ 1.58
SNIP1-203ENST00000493916 SPECC1Q5M775 1068 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 DDX53Q86TM3 631 aaKnown RBP24.89■■□□□ 1.58
SNIP1-203ENST00000493916 COLGALT2Q8IYK4 626 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 LINC00301Q8NCQ3 95 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.89■■□□□ 1.58
SNIP1-203ENST00000493916 LARP4BQ92615 738 aaKnown RBP24.89■■□□□ 1.58
SNIP1-203ENST00000493916 REEP2Q9BRK0 252 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 MRPL4Q9BYD3 311 aaKnown RBP24.89■■□□□ 1.58
SNIP1-203ENST00000493916 TLE6Q9H808 572 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 MIOSQ9NXC5 875 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 STK17AQ9UEE5 414 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 CCDC39Q9UFE4 941 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 PARP2Q9UGN5 583 aa24.89■■□□□ 1.58
SNIP1-203ENST00000493916 MYO7AQ13402 2215 aa24.89■■□□□ 1.57
SNIP1-203ENST00000493916 H3BQ06 376 aaPredicted RBP24.88■■□□□ 1.57
SNIP1-203ENST00000493916 SLC16A4O15374 487 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 LINC01565O15544 149 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 ALDH2P05091 517 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 GRIK3Q13003 919 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 SMC1AQ14683 1233 aaKnown RBP24.88■■□□□ 1.57
SNIP1-203ENST00000493916 EP400NLQ6ZTU2 488 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 TMC7Q7Z402 723 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 TMEM161BQ8NDZ6 487 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 KCNN1Q92952 543 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 ACO2Q99798 780 aaKnown RBP24.88■■□□□ 1.57
SNIP1-203ENST00000493916 ZBP1Q9H171 429 aa24.88■■□□□ 1.57
SNIP1-203ENST00000493916 LARSQ9P2J5 1176 aaKnown RBP24.88■■□□□ 1.57
SNIP1-203ENST00000493916 H0YCG3 227 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 TBX10O75333 385 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 F13A1P00488 732 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 MAPTP10636 758 aaKnown RBP24.87■■□□□ 1.57
SNIP1-203ENST00000493916 DDIT3P35638 169 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 ZNF131P52739 623 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 CACNB1Q02641 598 aaPredicted RBP24.87■■□□□ 1.57
SNIP1-203ENST00000493916 STK38Q15208 465 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 RBM23Q86U06 439 aaKnown RBP24.87■■□□□ 1.57
SNIP1-203ENST00000493916 UHRF1Q96T88 793 aaPredicted RBP24.87■■□□□ 1.57
SNIP1-203ENST00000493916 PTPRHQ9HD43 1115 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 SNTG2Q9NY99 539 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 KLK14Q9P0G3 267 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 FAN1Q9Y2M0 1017 aa24.87■■□□□ 1.57
SNIP1-203ENST00000493916 HIDE1A8MVS5 230 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 NRP1O14786 923 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 RECQL4O94761 1208 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 YEATS4O95619 227 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 SCP2P22307 547 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 NCKAP1LP55160 1127 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 DLX2Q07687 328 aaPredicted RBP24.86■■□□□ 1.57
SNIP1-203ENST00000493916 GIT2Q14161 759 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 DHX8Q14562 1220 aaKnown RBP24.86■■□□□ 1.57
SNIP1-203ENST00000493916 BMS1Q14692 1282 aaKnown RBP24.86■■□□□ 1.57
SNIP1-203ENST00000493916 VPS52Q8N1B4 723 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 MRPL43Q8N983 215 aaKnown RBP24.86■■□□□ 1.57
SNIP1-203ENST00000493916 RPS6KC1Q96S38 1066 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 VN1R3Q9BXE9 311 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 MUC3AQ02505 3323 aa24.86■■□□□ 1.57
SNIP1-203ENST00000493916 TTC28Q96AY4 2481 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 C2orf71A6NGG8 1288 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 PER2O15055 1255 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 SPTLC2O15270 562 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 PPP6R2O75170 966 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 GLP2RO95838 553 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 CTSAP10619 480 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 PROZP22891 400 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 NDUFV1P49821 464 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 STRN3Q13033 797 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 RRAGBQ5VZM2 374 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 PTCRAQ6ISU1 281 aaPredicted RBP24.85■■□□□ 1.57
SNIP1-203ENST00000493916 SPRYD3Q8NCJ5 442 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 TARS2Q9BW92 718 aaKnown RBP24.85■■□□□ 1.57
SNIP1-203ENST00000493916 PARVGQ9HBI0 331 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 MARCH5Q9NX47 278 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 IRAK3Q9Y616 596 aa24.85■■□□□ 1.57
SNIP1-203ENST00000493916 TDRD15B5MCY1 1934 aaKnown RBP24.84■■□□□ 1.57
SNIP1-203ENST00000493916 MYH11P35749 1972 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 GRXCR2A6NFK2 248 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 NR1I2O75469 434 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 FAM13AO94988 1023 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 BRD1O95696 1058 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 KRT18P05783 430 aaKnown RBP24.84■■□□□ 1.57
SNIP1-203ENST00000493916 OR1G1P47890 313 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 PKP1Q13835 747 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 ZNF568Q3ZCX4 644 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 FOXD4L5Q5VV16 416 aaPredicted RBP24.84■■□□□ 1.57
SNIP1-203ENST00000493916 CCDC73Q6ZRK6 1079 aa24.84■■□□□ 1.57
SNIP1-203ENST00000493916 FOXD4L4Q8WXT5 416 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms