RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.31□□□□□ -1.56
GTF3A-208ENST00000493903 FBXO2Q9UK22 296 aaPredicted RBP5.31□□□□□ -1.56
GTF3A-208ENST00000493903 TMEM59LQ9UK28 342 aa5.31□□□□□ -1.56
GTF3A-208ENST00000493903 MAGED2Q9UNF1 606 aaPredicted RBP5.31□□□□□ -1.56
GTF3A-208ENST00000493903 FITM1A5D6W6 292 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 H3BUI4 141 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 SKAP2O75563 359 aaPredicted RBP5.3□□□□□ -1.56
GTF3A-208ENST00000493903 ENDOD1O94919 500 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 AGR2O95994 175 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 ENO2P09104 434 aaPredicted RBP5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PARP1P09874 1014 aaKnown RBP5.3□□□□□ -1.56
GTF3A-208ENST00000493903 TYRP14679 529 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 MC4RP32245 332 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 HSPA7P48741 367 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 IRAK1P51617 712 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 FMO1Q01740 532 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PLS1Q14651 629 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 CYP26C1Q6V0L0 522 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 HEATR3Q7Z4Q2 680 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 COL23A1Q86Y22 540 aaPredicted RBP5.3□□□□□ -1.56
GTF3A-208ENST00000493903 TMTC2Q8N394 836 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 CCDC33Q8N5R6 958 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 GPR156Q8NFN8 814 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 OR2I1PQ8NGU4 316 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.3□□□□□ -1.56
GTF3A-208ENST00000493903 TBC1D20Q96BZ9 403 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 SLC35A4Q96G79 324 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 SAMD11Q96NU1 681 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 NT5C1BQ96P26 610 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 ALPK1Q96QP1 1244 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PLCD4Q9BRC7 762 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 BTBD2Q9BX70 525 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 AMNQ9BXJ7 453 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 TMEM120AQ9BXJ8 343 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 HAPLN2Q9GZV7 340 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 MANSC1Q9H8J5 431 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 C14orf93Q9H972 538 aaKnown RBP5.3□□□□□ -1.56
GTF3A-208ENST00000493903 ARMT1Q9H993 441 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PRDM7Q9NQW5 492 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PNPOQ9NVS9 261 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 GALNT8Q9NY28 637 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 DTLQ9NZJ0 730 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 CALCOCO1Q9P1Z2 691 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 ADAMTS6Q9UKP5 1117 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PCDHGB2Q9Y5G2 931 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 PCDHA13Q9Y5I0 950 aa5.3□□□□□ -1.56
GTF3A-208ENST00000493903 A0A1W2PPC4 97 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 GOLGA6L3A6NEY3 463 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 NOTOA8MTQ0 251 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 J3KRW8 73 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 APOL1O14791 398 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 NCAM2O15394 837 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 PLA2G6O60733 806 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 PHF2O75151 1096 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 CYBBP04839 570 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 FTH1P19P0C7X4 201 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 DHRS4L1P0CG22 281 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 SLC7A1P30825 629 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 ARL4AP40617 200 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 ARL4CP56559 192 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 ZP2Q05996 745 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 RAB39AQ14964 217 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 NOMO1Q15155 1222 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 MPEG1Q2M385 716 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 ZNF792Q3KQV3 632 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 ARL13BQ3SXY8 428 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 FKBP15Q5T1M5 1219 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 PAQR3Q6TCH7 311 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 RFX8Q6ZV50 586 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 CBLL1Q75N03 491 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 CACNA2D3Q8IZS8 1091 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 OR10H5Q8NGA6 315 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 PPP1R14CQ8TAE6 165 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 SNRNP27Q8WVK2 155 aaKnown RBP5.29□□□□□ -1.56
GTF3A-208ENST00000493903 HOXB13Q92826 284 aaPredicted RBP5.29□□□□□ -1.56
GTF3A-208ENST00000493903 TOE1Q96GM8 510 aaKnown RBP5.29□□□□□ -1.56
GTF3A-208ENST00000493903 CLPTM1LQ96KA5 538 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 PPP1R16BQ96T49 567 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 CNNM1Q9NRU3 951 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 TDP1Q9NUW8 608 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 SLAMF8Q9P0V8 285 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 NRBP1Q9UHY1 535 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 SIT1Q9Y3P8 196 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 CEP83Q9Y592 693 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 RB1CC1Q8TDY2 1594 aa5.29□□□□□ -1.56
GTF3A-208ENST00000493903 USP19O94966 1318 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 RPTORQ8N122 1335 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 ZNF839A8K0R7 811 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 EXOC5O00471 708 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 DBHP09172 617 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 BRAFP15056 766 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 PNLIPP16233 465 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 EN2P19622 333 aaPredicted RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SMARCA1P28370 1054 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 ALDH9A1P49189 494 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 EIF5P55010 431 aaKnown RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 FOXO1Q12778 655 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 PMS2P11Q13670 270 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SEPT2Q15019 361 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 ZACNQ401N2 412 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms