RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 EFNA5P52803 228 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 NUBP1P53384 320 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 ST3GAL1Q11201 340 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 GRIK3Q13003 919 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 MTMR3Q13615 1198 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-205ENST00000492851 PADI6Q6TGC4 694 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 MAEAQ7L5Y9 396 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 FBXL6Q8N531 539 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-205ENST00000492851 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 ADPGKQ9BRR6 497 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 RHOBTB2Q9BYZ6 727 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 IRF2BPLQ9H1B7 796 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 LRWD1Q9UFC0 647 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 KCNG1Q9UIX4 513 aa13.78□□□□□ -0.2
COL6A1-205ENST00000492851 PRG3Q9Y2Y8 225 aaPredicted RBP13.78□□□□□ -0.2
COL6A1-205ENST00000492851 ACKR2O00590 384 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 NPTXRO95502 500 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 SSBP05455 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL6A1-205ENST00000492851 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL6A1-205ENST00000492851 NAMPTP43490 491 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 SCNN1GP51170 649 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
COL6A1-205ENST00000492851 TMEM132AQ24JP5 1023 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 USP41Q3LFD5 358 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 KIAA0319Q5VV43 1072 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 OTOP3Q7RTS5 596 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 TDRD5Q8NAT2 981 aaKnown RBP13.77□□□□□ -0.21
COL6A1-205ENST00000492851 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
COL6A1-205ENST00000492851 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 KIFAP3Q92845 792 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 ZFP42Q96MM3 310 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 APOL6Q9BWW8 343 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 RXFP1Q9HBX9 757 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 CHST7Q9NS84 486 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 HES2Q9Y543 173 aa13.77□□□□□ -0.21
COL6A1-205ENST00000492851 A0A087WWV3 80 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 ST18O60284 1047 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 B4GALT3O60512 393 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 TADA2AO75478 443 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 EFEMP2O95967 443 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 GLUD1P00367 558 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 AKAP5P24588 427 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
COL6A1-205ENST00000492851 DSG1Q02413 1049 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-205ENST00000492851 KCTD17Q8N5Z5 321 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 C12orf76Q8N812 135 aaPredicted RBP13.76□□□□□ -0.21
COL6A1-205ENST00000492851 KREMEN2Q8NCW0 462 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 NXF3Q9H4D5 531 aaKnown RBP13.76□□□□□ -0.21
COL6A1-205ENST00000492851 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 MARCH5Q9NX47 278 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 MIOSQ9NXC5 875 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
COL6A1-205ENST00000492851 C2CD4DB7Z1M9 353 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 C2CD2LO14523 706 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 TEX28O15482 410 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 B4GALT5O43286 388 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 THP07101 528 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 PTPN5P54829 565 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 TUSC3Q13454 348 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 RABEP1Q15276 862 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 KRT79Q5XKE5 535 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 PDXDC1Q6P996 788 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 CCDC149Q6ZUS6 474 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 STAMQ92783 540 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 ASIC4Q96FT7 647 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
COL6A1-205ENST00000492851 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 KIAA1024Q9UPX6 916 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
COL6A1-205ENST00000492851 SF3B1O75533 1304 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL6A1-205ENST00000492851 K7ERI5 159 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 PRKCBP05771 671 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-205ENST00000492851 PRPHP41219 470 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 NHLH1Q02575 133 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
COL6A1-205ENST00000492851 PTGDRQ13258 359 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 HSP90AA2PQ14568 343 aaPredicted RBP13.74□□□□□ -0.21
COL6A1-205ENST00000492851 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 FUT10Q6P4F1 479 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 IGSF22Q8N9C0 903 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 KIF2CQ99661 725 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 BHMT2Q9H2M3 363 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 C17orf75Q9HAS0 396 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 MAN1C1Q9NR34 630 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms