RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 CYP3A7-CYP3A51PA0A087WV96 503 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 CCDC196A0A1B0GTZ2 297 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 F8W810 466 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 GLUD1P00367 558 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 SPATA31D3P0C874 917 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 CPA1P15085 419 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 CYP3A7P24462 503 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 GLUD2P49448 558 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 DSG1Q02413 1049 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 DSC1Q08554 894 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 HTR4Q13639 388 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 PLA2G4FQ68DD2 849 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 SPATA31D4Q6ZUB0 917 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
HDAC3-213ENST00000492506 HDAC7Q8WUI4 952 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 SMG7Q92540 1137 aaKnown RBP14.64□□□□□ -0.07
HDAC3-213ENST00000492506 RUBCNQ92622 972 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 FAM193BQ96PV7 902 aaPredicted RBP14.64□□□□□ -0.07
HDAC3-213ENST00000492506 NT5C3AQ9H0P0 336 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 CHST7Q9NS84 486 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 SSX2IPQ9Y2D8 614 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 PRG3Q9Y2Y8 225 aaPredicted RBP14.64□□□□□ -0.07
HDAC3-213ENST00000492506 COL4A3BPQ9Y5P4 624 aa14.64□□□□□ -0.07
HDAC3-213ENST00000492506 ZFHX4Q86UP3 3567 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 TDP2O95551 362 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 C1RP00736 705 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 SYCP1Q15431 976 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 LILRA6Q6PI73 481 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 ZC3H14Q6PJT7 736 aaKnown RBP14.63□□□□□ -0.07
HDAC3-213ENST00000492506 PJA1Q8NG27 643 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 ETNPPLQ8TBG4 499 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 TBCKQ8TEA7 893 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 MBOAT7Q96N66 472 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 FOXQ1Q9C009 403 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 MIOSQ9NXC5 875 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.63□□□□□ -0.07
HDAC3-213ENST00000492506 VPS54Q9P1Q0 977 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 DPP7Q9UHL4 492 aa14.63□□□□□ -0.07
HDAC3-213ENST00000492506 EML1O00423 815 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 TGM5O43548 720 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 LRRN2O75325 713 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 RFX1P22670 979 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 NPEPPSP55786 919 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 STARD6P59095 220 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 DCLRE1AQ6PJP8 1040 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 SRGAP1Q7Z6B7 1085 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 PALB2Q86YC2 1186 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 ST13P5Q8NFI4 369 aaPredicted RBP14.62□□□□□ -0.07
HDAC3-213ENST00000492506 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 PRPF31Q8WWY3 499 aaKnown RBP14.62□□□□□ -0.07
HDAC3-213ENST00000492506 JPH2Q9BR39 696 aaPredicted RBP14.62□□□□□ -0.07
HDAC3-213ENST00000492506 RPP25Q9BUL9 199 aaKnown RBP14.62□□□□□ -0.07
HDAC3-213ENST00000492506 RNF26Q9BY78 433 aaPredicted RBP14.62□□□□□ -0.07
HDAC3-213ENST00000492506 PRKD2Q9BZL6 878 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 PLEKHA4Q9H4M7 779 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 DHX33Q9H6R0 707 aaKnown RBP14.62□□□□□ -0.07
HDAC3-213ENST00000492506 TMEM51Q9NW97 253 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 NUMBLQ9Y6R0 609 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 VWA8A3KMH1 1905 aa14.62□□□□□ -0.07
HDAC3-213ENST00000492506 ARL5CA6NH57 179 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 M0R2N6 131 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 SRGAP2CP0DJJ0 459 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 OR1G1P47890 313 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 PSMC5P62195 406 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 LAMTOR4Q0VGL1 99 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 KRT32Q14532 448 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 ELMSAN1Q6PJG2 1045 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 Q6ZUG5 572 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 BRF1Q92994 677 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 TMEM143Q96AN5 459 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 B3GALT6Q96L58 329 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 GAD1Q99259 594 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 EIF2AQ9BY44 585 aaKnown RBP14.61□□□□□ -0.07
HDAC3-213ENST00000492506 ZDHHC7Q9NXF8 308 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 WRAP73Q9P2S5 460 aaPredicted RBP14.61□□□□□ -0.07
HDAC3-213ENST00000492506 IPPQ9Y573 584 aa14.61□□□□□ -0.07
HDAC3-213ENST00000492506 GAS2O43903 313 aaKnown RBP14.6□□□□□ -0.07
HDAC3-213ENST00000492506 TPM3P06753 285 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
HDAC3-213ENST00000492506 ITGA4P13612 1032 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 IFNAR1P17181 557 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 GPC5P78333 572 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 RSPO4Q2I0M5 234 aaPredicted RBP14.6□□□□□ -0.07
HDAC3-213ENST00000492506 GET4Q7L5D6 327 aaPredicted RBP14.6□□□□□ -0.07
HDAC3-213ENST00000492506 FBXL16Q8N461 479 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 CNNM3Q8NE01 707 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 GSTCDQ8NEC7 633 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 FGF14Q92915 247 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 KCNB2Q92953 911 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 ZFP42Q96MM3 310 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 CNTNAP3BQ96NU0 1288 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 HINFPQ9BQA5 517 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 DDX23Q9BUQ8 820 aaKnown RBP14.6□□□□□ -0.07
HDAC3-213ENST00000492506 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 CNTNAP3Q9BZ76 1288 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 GPR62Q9BZJ7 368 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 PIDD1Q9HB75 910 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 UBN1Q9NPG3 1134 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms