RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 HIST1H2AJQ99878 128 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CPPED1Q9BRF8 314 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 TTPALQ9BTX7 342 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CHMP4AQ9BY43 222 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 KRTAP3-1Q9BYR8 98 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 API5Q9BZZ5 524 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SLKQ9H2G2 1235 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 NRDE2Q9H7Z3 1164 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SPON1Q9HCB6 807 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 NCOA5Q9HCD5 579 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SMC4Q9NTJ3 1288 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 KCMF1Q9P0J7 381 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 POGKQ9P215 609 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 EIF2B4Q9UI10 523 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RRP7AQ9Y3A4 280 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SH3BP1Q9Y3L3 701 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 KDM5AP29375 1690 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ARHGAP5Q13017 1502 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ABCC2Q92887 1545 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 NSD2O96028 1365 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 KIF24Q5T7B8 1368 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 AK9Q5TCS8 1911 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SYNMO15061 1565 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 SAMD9LQ8IVG5 1584 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 IQGAP1P46940 1657 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TCHHQ07283 1943 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 C2orf78A6NCI8 922 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TMEM191CA6NGB0 347 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 RASSF10A6NK89 507 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 OVOL3O00110 214 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 IPO13O94829 963 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PRPF6O94906 941 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 FSBPO95073 299 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 LETM1O95202 739 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TPM2P07951 284 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 HSP90AB1P08238 724 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF853P0CG23 659 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TRIM27P14373 513 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 HNRNPLP14866 589 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 SDHAP31040 664 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TNNT2P45379 298 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ADCY7P51828 1080 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 KPNA1P52294 538 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 IL2P60568 153 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 LMOD3Q0VAK6 560 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 NFYCQ13952 458 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF460Q14592 562 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 R3HDM1Q15032 1099 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PTPAQ15257 358 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 RABEP1Q15276 862 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TM4SF20Q53R12 229 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 RRP12Q5JTH9 1297 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 KANK2Q63ZY3 851 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TMEM200BQ69YZ2 307 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 MFSD5Q6N075 450 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 GGT6Q6P531 493 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ABHD17CQ6PCB6 329 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 CASC1Q6TDU7 716 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 MAMDC4Q6UXC1 1216 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 MTERF4Q7Z6M4 381 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PHYKPLQ8IUZ5 450 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 DNAJC10Q8IXB1 793 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ZZZ3Q8IYH5 903 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 Q8N1X5 172 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 NXPE1Q8N323 547 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TMEM57Q8N5G2 664 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 GSTCDQ8NEC7 633 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 IL17DQ8TAD2 202 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 CPT1CQ8TCG5 803 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF483Q8TF39 744 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 HAS1Q92839 578 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 TNPO1Q92973 898 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 CHFRQ96EP1 664 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PHACTR3Q96KR7 559 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 DRC1Q96MC2 740 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 CLUHP3Q96NS8 147 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 GPR101Q96P66 508 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 MAP7D2Q96T17 732 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ELF4Q99607 663 aaPredicted RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 FOXB1Q99853 325 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 MYL10Q9BUA6 226 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 CDK19Q9BWU1 502 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PCED1AQ9H1Q7 454 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 POFUT1Q9H488 388 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 AGO3Q9H9G7 860 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 IL23AQ9NPF7 189 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 THG1LQ9NWX6 298 aaKnown RBP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 SORCS3Q9UPU3 1222 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 SLC30A1Q9Y6M5 507 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PREX2Q70Z35 1606 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 ABCC11Q96J66 1382 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 SPHKAPQ2M3C7 1700 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 UHRF1BP1LA0JNW5 1464 aa2.45□□□□□ -2.02
SNRNP40-207ENST00000491106 PLXNC1O60486 1568 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ZFYVE9O95405 1425 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 TRAPPC8Q9Y2L5 1435 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 ARAP3Q8WWN8 1544 aa2.44□□□□□ -2.02
SNRNP40-207ENST00000491106 MATN2O00339 956 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms