RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 LAMTOR5O43504 91 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 ZMYND10O75800 440 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 KRT32Q14532 448 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 MLF2Q15773 248 aaPredicted RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 VARS2Q5ST30 1063 aaKnown RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 TSSK4Q6SA08 328 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 BCO2Q9BYV7 579 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 DHX33Q9H6R0 707 aaKnown RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 DDX25Q9UHL0 483 aaKnown RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 SMG5Q9UPR3 1016 aaKnown RBP17.1■□□□□ 0.33
SCAMP3-208ENST00000490999 FANCMQ8IYD8 2048 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 KANSL1LA0AUZ9 987 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 CCL16O15467 120 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 PAPLNO95428 1278 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 AKAP5P24588 427 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 USP41Q3LFD5 358 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 LILRA6Q6PI73 481 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 LXNQ9BS40 222 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 SLKQ9H2G2 1235 aaPredicted RBP17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 KLK14Q9P0G3 267 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 ADAM28Q9UKQ2 775 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 CDH7Q9ULB5 785 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 PCDHA4Q9UN74 947 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
SCAMP3-208ENST00000490999 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 ZBTB39O15060 712 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 SPTLC1O15269 473 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 NR1I2O75469 434 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 HMGB1P09429 215 aaKnown RBP17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 CYP3A7P24462 503 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 RFC5P40937 340 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 ATXN1P54253 815 aaKnown RBP17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 INF2Q27J81 1249 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 NOTUMQ6P988 496 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 CNNM3Q8NE01 707 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 ITFG1Q8TB96 612 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 FGF13Q92913 245 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 SHDQ96IW2 340 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 PAAF1Q9BRP4 392 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 FBXW11Q9UKB1 542 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 MAP1BP46821 2468 aaKnown RBP17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 MYH15Q9Y2K3 1946 aa17.08■□□□□ 0.32
SCAMP3-208ENST00000490999 PATJQ8NI35 1801 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 USP24Q9UPU5 2620 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 DCDC2BA2VCK2 349 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 FAM170BA6NMN3 283 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 INO80B-WBP1J3KQ70 363 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 B4GALT5O43286 388 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 C8AP07357 584 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 IFNAR1P17181 557 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 YWHABP31946 246 aaKnown RBP17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 GSTCDQ8NEC7 633 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 ING5Q8WYH8 240 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 AIFM3Q96NN9 605 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 CSRNP2Q9H175 543 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 HCFC1R1Q9NWW0 138 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 RGL1Q9NZL6 768 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 FNIP2Q9P278 1114 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 FBXO4Q9UKT5 387 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 CDV3Q9UKY7 258 aaKnown RBP17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 USP18Q9UMW8 372 aa17.07■□□□□ 0.32
SCAMP3-208ENST00000490999 CASTOR2A6NHX0 329 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 ADAM12O43184 909 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 NPTXRO95502 500 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 CYP4A11Q02928 519 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 MBTD1Q05BQ5 628 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 PPP2R5CQ13362 524 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 NPY5RQ15761 445 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 AMHR2Q16671 573 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 ZNF528Q3MIS6 628 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 SLC44A4Q53GD3 710 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 PPM1LQ5SGD2 360 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 TPRG1Q6ZUI0 275 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 BLIDQ8IZY5 108 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 ASAP3Q8TDY4 903 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 MTRQ99707 1265 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 PCDHGA2Q9Y5H1 932 aa17.06■□□□□ 0.32
SCAMP3-208ENST00000490999 MIA3Q5JRA6 1907 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms