RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 PPP4R3AQ6IN85 833 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 OTOP3Q7RTS5 596 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 SRGAP1Q7Z6B7 1085 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 NEK8Q86SG6 692 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 CCDC83Q8IWF9 413 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 C4orf19Q8IY42 314 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 SIX5Q8N196 739 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 PLCD3Q8N3E9 789 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 NECAB1Q8N987 351 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 DYDC2Q96IM9 177 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 GAD1Q99259 594 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 EMILIN2Q9BXX0 1053 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 IRF2BPLQ9H1B7 796 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 MFSD1Q9H3U5 465 aa9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
PCOLCE-209ENST00000490909 CARNS1A5YM72 827 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 LARGE1O95461 756 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 GLUD1P00367 558 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 CFHP08603 1231 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 ARF4P18085 180 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 PDCP20941 246 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 OR1G1P47890 313 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 DSG1Q02413 1049 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 NR5A1Q13285 461 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 ANGPT1Q15389 498 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 PIK3AP1Q6ZUJ8 805 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 CDR2LQ86X02 465 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 FAM184AQ8NB25 1140 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 ST13P5Q8NFI4 369 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 RABGGTAQ92696 567 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 ACSF2Q96CM8 615 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 MTRQ99707 1265 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 JPH2Q9BR39 696 aaPredicted RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 PAAF1Q9BRP4 392 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 RHOBTB2Q9BYZ6 727 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 GPR62Q9BZJ7 368 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 CXCL16Q9H2A7 254 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 RXFP1Q9HBX9 757 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 WDR6Q9NNW5 1121 aaKnown RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 MRPL17Q9NRX2 175 aaKnown RBP9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 CHST7Q9NS84 486 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 EPS15L1Q9UBC2 864 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 SMC3Q9UQE7 1217 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 FAN1Q9Y2M0 1017 aa9.39□□□□□ -0.91
PCOLCE-209ENST00000490909 CCDC195A0A1B0GUA6 201 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 CCDC194A0A1B0GVG4 234 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 SPDYE4A6NLX3 237 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 TTLL13PA6NNM8 815 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 TBX3O15119 743 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 TGM5O43548 720 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 ERLIN2O94905 339 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 EDN1P05305 212 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 ADH1AP07327 375 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 HSP90AA1P07900 732 aaKnown RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 SPATA31D3P0C874 917 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 ITGA4P13612 1032 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 GCFC2P16383 781 aaKnown RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 GLRA2P23416 452 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 AKAP5P24588 427 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 PTENP60484 403 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 HTR4Q13639 388 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 TRIM29Q14134 588 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 BMS1Q14692 1282 aaKnown RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 EPHA7Q15375 998 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 RTP2Q5QGT7 225 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 FUT10Q6P4F1 479 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 NOTUMQ6P988 496 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 SPATA31D4Q6ZUB0 917 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 GLYCTKQ8IVS8 523 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 ADSSL1Q8N142 457 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 DTWD2Q8NBA8 298 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 SMG7Q92540 1137 aaKnown RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 NKD2Q969F2 451 aaPredicted RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 FAM20AQ96MK3 541 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 DLGAP2Q9P1A6 1054 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 CA14Q9ULX7 337 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 ZFHX4Q86UP3 3567 aa9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 KMT2BQ9UMN6 2715 aaPredicted RBP9.38□□□□□ -0.91
PCOLCE-209ENST00000490909 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 POTEMA6NI47 508 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 INO80B-WBP1J3KQ70 363 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 KIF4AO95239 1232 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 FDPSP14324 419 aaKnown RBP9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 GLULP15104 373 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 GBP2P32456 591 aaPredicted RBP9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 XKR9Q5GH70 373 aa9.37□□□□□ -0.91
PCOLCE-209ENST00000490909 LILRA6Q6PI73 481 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms