RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 APOL5Q9BWW9 433 aa34.6■■■■□ 3.13
LDB1-204ENST00000490751 HIP1RO75146 1068 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 EFNA5P52803 228 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 PTPN14Q15678 1187 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 HYIQ5T013 277 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 RINT1Q6NUQ1 792 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 DAW1Q8N136 415 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 SUSD6Q92537 303 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 S1PR5Q9H228 398 aa34.59■■■■□ 3.13
LDB1-204ENST00000490751 SSBP05455 408 aaKnown RBP eCLIP34.58■■■■□ 3.13
LDB1-204ENST00000490751 HOXB8P17481 243 aaPredicted RBP34.58■■■■□ 3.13
LDB1-204ENST00000490751 BRAPQ7Z569 592 aa34.58■■■■□ 3.13
LDB1-204ENST00000490751 RPS6KC1Q96S38 1066 aa34.58■■■■□ 3.13
LDB1-204ENST00000490751 ADPGKQ9BRR6 497 aa34.58■■■■□ 3.13
LDB1-204ENST00000490751 VPS37CA5D8V6 355 aaPredicted RBP34.57■■■■□ 3.12
LDB1-204ENST00000490751 PEX3P56589 373 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 GRIK3Q13003 919 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 EEF1DP3Q658K8 133 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 C1orf186Q6ZWK4 172 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 DRC1Q96MC2 740 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 PLIN2Q99541 437 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 NT5C3AQ9H0P0 336 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 SNTG2Q9NY99 539 aa34.57■■■■□ 3.12
LDB1-204ENST00000490751 CCDC169A6NNP5 214 aa34.56■■■■□ 3.12
LDB1-204ENST00000490751 NR1I2O75469 434 aa34.56■■■■□ 3.12
LDB1-204ENST00000490751 CDK5RAP3Q96JB5 506 aa34.56■■■■□ 3.12
LDB1-204ENST00000490751 PHF7Q9BWX1 381 aaPredicted RBP34.56■■■■□ 3.12
LDB1-204ENST00000490751 K7ERI5 159 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 SOD2P04179 222 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 ALADP13716 330 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 NPTX2P47972 431 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 MAPK7Q13164 816 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 DMP1Q13316 513 aaPredicted RBP34.55■■■■□ 3.12
LDB1-204ENST00000490751 TPRNQ4KMQ1 711 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 NT5DC1Q5TFE4 455 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 HERC2P3Q9BVR0 1158 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 PHLPP2Q6ZVD8 1323 aa34.55■■■■□ 3.12
LDB1-204ENST00000490751 F8W810 466 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 DCXO43602 365 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 RECQL4O94761 1208 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 PDCP20941 246 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 CBX2Q14781 532 aaPredicted RBP34.54■■■■□ 3.12
LDB1-204ENST00000490751 TMEM31Q5JXX7 168 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 ATF7IP2Q5U623 682 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 KCTD17Q8N5Z5 321 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 COLEC11Q9BWP8 271 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 C11orf16Q9NQ32 467 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 MYH11P35749 1972 aa34.54■■■■□ 3.12
LDB1-204ENST00000490751 FAM86C2PA6NEL3 165 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 BMP15O95972 392 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 EPCAMP16422 314 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 COL9A1P20849 921 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 GUCY2CP25092 1073 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 DCAF4L1Q3SXM0 396 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 CABP7Q86V35 215 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 SLC22A17Q8WUG5 538 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 AK8Q96MA6 479 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 LRFN3Q9BTN0 628 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 TIPINQ9BVW5 301 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 EMILIN2Q9BXX0 1053 aa34.53■■■■□ 3.12
LDB1-204ENST00000490751 MRPL17Q9NRX2 175 aaKnown RBP34.53■■■■□ 3.12
LDB1-204ENST00000490751 LOC730098B7Z3J9 87 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 URODP06132 367 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 TMEM119Q4V9L6 283 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 TAS1R1Q7RTX1 841 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 RNF135Q8IUD6 432 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 RNF168Q8IYW5 571 aaPredicted RBP34.52■■■■□ 3.12
LDB1-204ENST00000490751 SYT2Q8N9I0 419 aaPredicted RBP34.52■■■■□ 3.12
LDB1-204ENST00000490751 KLHL5Q96PQ7 755 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 KMT5AQ9NQR1 393 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 DZANK1Q9NVP4 752 aa34.52■■■■□ 3.12
LDB1-204ENST00000490751 C2CD2LO14523 706 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 GPR37L1O60883 481 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 LILRB3O75022 631 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 EFEMP2O95967 443 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 CNPP09543 421 aaKnown RBP34.51■■■■□ 3.12
LDB1-204ENST00000490751 RAD51AP2Q09MP3 1159 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 SF3A1Q15459 793 aaKnown RBP34.51■■■■□ 3.12
LDB1-204ENST00000490751 PPFIBP1Q86W92 1011 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 RPGRIP1Q96KN7 1286 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 TMEM134Q9H6X4 195 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 C17orf75Q9HAS0 396 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 ARHGAP28Q9P2N2 729 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 CDH22Q9UJ99 828 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 GDAQ9Y2T3 454 aa34.51■■■■□ 3.12
LDB1-204ENST00000490751 SFI1A8K8P3 1242 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 PLA2G4BP0C869 781 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 SLC12A3P55017 1021 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 TUSC3Q13454 348 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 CES5AQ6NT32 575 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 RABGGTAQ92696 567 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 CXCL16Q9H2A7 254 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 ADAM7Q9H2U9 754 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 CACNG4Q9UBN1 327 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 MUTYHQ9UIF7 546 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 TNFSF13BQ9Y275 285 aa34.5■■■■□ 3.11
LDB1-204ENST00000490751 PTGESO14684 152 aa34.49■■■■□ 3.11
LDB1-204ENST00000490751 KLRC2P26717 231 aa34.49■■■■□ 3.11
LDB1-204ENST00000490751 UBA7P41226 1012 aa34.49■■■■□ 3.11
LDB1-204ENST00000490751 GLUD2P49448 558 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms