RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TCEAL9Q9UHQ7 104 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 WASF3Q9UPY6 502 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 DMXL2Q8TDJ6 3036 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 FLNBO75369 2602 aaKnown RBP15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 CNTNAP2Q9UHC6 1331 aa15.41■□□□□ 0.06
EXOSC3-207ENST00000490516 TMEM8BA6NDV4 472 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 E7EWF7 191 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 TAF4O00268 1085 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 MAN2B1O00754 1011 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 GIPC1O14908 333 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 HNRNPA1P09651 372 aaKnown RBP eCLIP15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 ZNF806P0C7X5 589 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 HOXC13P31276 330 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 CNR2P34972 360 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 DSC1Q08554 894 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 USP41Q3LFD5 358 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 UBXN11Q5T124 520 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 FUT10Q6P4F1 479 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 POTEHQ6S545 545 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 LONP2Q86WA8 852 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 RHPN2Q8IUC4 686 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 GATA6Q92908 595 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 MCRS1Q96EZ8 462 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 IER2Q9BTL4 223 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 INO80BQ9C086 356 aaPredicted RBP15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 SMOC1Q9H4F8 434 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 TBC1D22BQ9NU19 505 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 ITPR1Q14643 2758 aa15.4■□□□□ 0.06
EXOSC3-207ENST00000490516 ADAMTS20P59510 1910 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 C8AP07357 584 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 NAPAP54920 295 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 CDC42EP1Q00587 391 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 GRM2Q14416 872 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 TARBP2Q15633 366 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 LIN9Q5TKA1 542 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 TANGO2Q6ICL3 276 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 ZCCHC14Q8WYQ9 949 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 FAM3CQ92520 227 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 RABGGTAQ92696 567 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 DNASE1L2Q92874 299 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 NLRP4Q96MN2 994 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 SH2D3AQ9BRG2 576 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 LNPKQ9C0E8 428 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 AGPAT5Q9NUQ2 364 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 MIOSQ9NXC5 875 aa15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 DNMT3BQ9UBC3 853 aaKnown RBP15.39■□□□□ 0.05
EXOSC3-207ENST00000490516 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 K7ESF4 209 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 HIP1O00291 1037 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 XYLBO75191 536 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 NOVA1P51513 510 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 ADCY7P51828 1080 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 MTERF2Q49AM1 385 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 PABPC1LQ4VXU2 614 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 ZNF410Q86VK4 478 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 MB21D2Q8IYB1 491 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 SMG8Q8ND04 991 aaKnown RBP15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 GAD1Q99259 594 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 COLEC11Q9BWP8 271 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 SUCLA2Q9P2R7 463 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
EXOSC3-207ENST00000490516 CHRNB1P11230 501 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 ITGA4P13612 1032 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 HOXA11P31270 313 aaPredicted RBP15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 MLH1P40692 756 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 CLK2P49760 499 aaKnown RBP15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 DNM2P50570 870 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 SCNN1GP51170 649 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 CREMQ03060 361 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 RTP2Q5QGT7 225 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 NFXL1Q6ZNB6 911 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 GPR65Q8IYL9 337 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 ZFP42Q96MM3 310 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 CEP89Q96ST8 783 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 CLSTN3Q9BQT9 956 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 BRD9Q9H8M2 597 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 IFT122Q9HBG6 1241 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 DISC1Q9NRI5 854 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
EXOSC3-207ENST00000490516 EML5Q05BV3 1969 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 ASH1LQ9NR48 2969 aaKnown RBP15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 IGKV6-21A0A0C4DH24 114 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 WDR64B1ANS9 1081 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 NRG2O14511 850 aaPredicted RBP15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 HOXA9P31269 272 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 AP3B2Q13367 1082 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 SLC5A9Q2M3M2 681 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 JAKMIP3Q5VZ66 844 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 RNF43Q68DV7 783 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 TMTC3Q6ZXV5 915 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 SPEM1Q8N4L4 309 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 CRYGNQ8WXF5 182 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 ELSPBP1Q96BH3 223 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 SCNM1Q9BWG6 230 aa15.36■□□□□ 0.05
EXOSC3-207ENST00000490516 RBM12Q9NTZ6 932 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms