RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 U2AF1Q01081 240 aaKnown RBP eCLIP6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 ROM1Q03395 351 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 ADCY2Q08462 1091 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 MYBPC3Q14896 1274 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 ARHGAP29Q52LW3 1261 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 IFIT1BQ5T764 474 aaKnown RBP6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 CD276Q5ZPR3 534 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 SLFN12LQ6IEE8 588 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 UNQ6494/PRO21346Q6UXR6 183 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 TMC5Q6UXY8 1006 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 CD300LDQ6UXZ3 194 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 ETV3LQ6ZN32 361 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 CTU1Q7Z7A3 348 aaKnown RBP6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 FAM126BQ8IXS8 530 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 TSPAN17Q96FV3 270 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 MAML3Q96JK9 1138 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 PRDM12Q9H4Q4 367 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 ANLNQ9NQW6 1124 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 OBP2AQ9NY56 170 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 BTBD7Q9P203 1132 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 KLHL14Q9P2G3 628 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 DPP7Q9UHL4 492 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 ATRXP46100 2492 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 GPRASP1Q5JY77 1395 aa6.17□□□□□ -1.42
SSX2IP-208ENST00000490476 CEP162Q5TB80 1403 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 EYSQ5T1H1 3165 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 NFIBO00712 420 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 PLIN1O60240 522 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 PCDH8O95206 1070 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 ZRANB2O95218 330 aaKnown RBP eCLIP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 PRLP01236 227 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 MYL1P05976 194 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 C5AR1P21730 350 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 PTGS1P23219 599 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 LGALS4P56470 323 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 KRT85P78386 507 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 ZNF200P98182 395 aaPredicted RBP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 CDK17Q00537 523 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 KIF23Q02241 960 aaPredicted RBP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 CCSAPQ6IQ19 270 aaPredicted RBP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 LRSAM1Q6UWE0 723 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 EPM2AIP1Q7L775 607 aaPredicted RBP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 TMC6Q7Z403 805 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 MIER2Q8N344 545 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 FAM26EQ8N5C1 309 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 TIFAQ96CG3 184 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 P2RX7Q99572 595 aaKnown RBP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 SLC6A17Q9H1V8 727 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 KCTD10Q9H3F6 313 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 SAP30BPQ9UHR5 308 aaKnown RBP6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 RCAN3Q9UKA8 241 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 USP18Q9UMW8 372 aa6.16□□□□□ -1.42
SSX2IP-208ENST00000490476 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 H0YGN5 161 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 AP1G1O43747 822 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 NDUFS2O75306 463 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 DPEP1P16444 411 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 VCAM1P19320 739 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 LPOP22079 712 aaPredicted RBP6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 MTNR1BP49286 362 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 NKX3-2P78367 333 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 PFKPQ01813 784 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 ALDH6A1Q02252 535 aaKnown RBP6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 TMEM62Q0P6H9 643 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 MOGSQ13724 837 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 NOLC1Q14978 699 aaKnown RBP eCLIP6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 UAP1L1Q3KQV9 507 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 PHF19Q5T6S3 580 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 KIAA1841Q6NSI8 718 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 CATIPQ7Z7H3 387 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 AMIGO3Q86WK7 504 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 DGKHQ86XP1 1220 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 WDR48Q8TAF3 677 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 RAX2Q96IS3 184 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 PSMD1Q99460 953 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 CSRNP2Q9H175 543 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 ARNT2Q9HBZ2 717 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 INCENPQ9NQS7 918 aa6.15□□□□□ -1.42
SSX2IP-208ENST00000490476 C4AP0C0L4 1744 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 C4BP0C0L5 1744 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 KIF1BO60333 1816 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 MPIG6BO95866 241 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 ENO2P09104 434 aaPredicted RBP6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 MYBP10242 640 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 MTHFD2P13995 350 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 GLRBP48167 497 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 RHBDL3P58872 404 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 MRPS9P82933 396 aaKnown RBP6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 GTF2H3Q13889 308 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 TRIM25Q14258 630 aaKnown RBP6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 ZNF267Q14586 743 aaPredicted RBP6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 RRP12Q5JTH9 1297 aaKnown RBP6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 VASNQ6EMK4 673 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 LIPIQ6XZB0 460 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 KCNK18Q7Z418 384 aa6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 ZC3H18Q86VM9 953 aaKnown RBP6.14□□□□□ -1.43
SSX2IP-208ENST00000490476 MIB1Q86YT6 1006 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms