RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 STAG2Q8N3U4 1231 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 PANK1Q8TE04 598 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 OSMRQ99650 979 aa8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 LSM14BQ9BX40 385 aaKnown RBP8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 MTCL1Q9Y4B5 1905 aaKnown RBP8.16□□□□□ -1.1
PDLIM1-203ENST00000490391 ZMYM6O95789 1325 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 INPPL1O15357 1258 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 B4GALT3O60512 393 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 ZC3H11AO75152 810 aaKnown RBP eCLIP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 GPR32O75388 356 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 TOP3BO95985 862 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 GALTP07902 379 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 SPINK2P20155 84 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 HAND2P61296 217 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 SF3A2Q15428 464 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 LCE3BQ5TA77 95 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 GET4Q7L5D6 327 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 BPHLQ86WA6 291 aaPredicted RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 SMG7Q92540 1137 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 GPRASP2Q96D09 838 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 MRPL9Q9BYD2 267 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 ZBTB40Q9NUA8 1239 aa8.15□□□□□ -1.1
PDLIM1-203ENST00000490391 A0A0U1RQF3 1178 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 PCP11498 1178 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 ITGB5P18084 799 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 FSHRP23945 695 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 KLRC1P26715 233 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 CRYBB1P53674 252 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 NRLP54845 237 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 SIM2Q14190 667 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 AGERQ15109 404 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 STPG1Q5TH74 334 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 PSAPL1Q6NUJ1 521 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 PLPPR4Q7Z2D5 763 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 NLRX1Q86UT6 975 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 ENAHQ8N8S7 591 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 RNF169Q8NCN4 708 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 PI4K2BQ8TCG2 481 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 ZCCHC14Q8WYQ9 949 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 BBC3Q96PG8 261 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 PPP1R16BQ96T49 567 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 NELL2Q99435 816 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 EMILIN2Q9BXX0 1053 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 NT5C3AQ9H0P0 336 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 NRDE2Q9H7Z3 1164 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 ZFP37Q9Y6Q3 630 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 COL12A1Q99715 3063 aa8.14□□□□□ -1.11
PDLIM1-203ENST00000490391 PCNX2A6NKB5 2137 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 KLRF2D3W0D1 207 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 GIPC1O14908 333 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 TEX28O15482 410 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 SSBP05455 408 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 SLC11A1P49279 550 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 RBM25P49756 843 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 ADCY1Q08828 1119 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 SRSF5Q13243 272 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 GAS6Q14393 721 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 AASDHQ4L235 1098 aaPredicted RBP8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 MFSD6Q6ZSS7 791 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 TPRG1Q6ZUI0 275 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 CDHR1Q96JP9 859 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 PIGSQ96S52 555 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 TBC1D13Q9NVG8 400 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 DNAJB4Q9UDY4 337 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 MAD2L2Q9UI95 211 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 MAP4K5Q9Y4K4 846 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 NOTCH4Q99466 2003 aa8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 ASCC3Q8N3C0 2202 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-203ENST00000490391 COL4A2P08572 1712 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 CARNS1A5YM72 827 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 PALM3A6NDB9 673 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 MEIS3P2A8K0S8 358 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 MEIS2O14770 477 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 NCAM2O15394 837 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 CYTH3O43739 400 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 C22orf31O95567 290 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 EFEMP2O95967 443 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 GLUD1P00367 558 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 VTNP04004 478 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 ADH1AP07327 375 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 ZNF806P0C7X5 589 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 MYBP10242 640 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 ZSCAN20P17040 1043 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 CLCN1P35523 988 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 PFKPQ01813 784 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 ZNF252P-AS1Q0IIN9 211 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 USP17L6PQ6QN14 398 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 Q6ZVU0 165 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 RNF168Q8IYW5 571 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 CCDC116Q8IYX3 515 aa8.12□□□□□ -1.11
PDLIM1-203ENST00000490391 HDAC7Q8WUI4 952 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms