RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 CRIP3Q6Q6R5 217 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 VHLLQ6RSH7 139 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 SYT10Q6XYQ8 523 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 PPP1R42Q7Z4L9 355 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 FERMT3Q86UX7 667 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 ZNF575Q86XF7 245 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 TICAM2Q86XR7 235 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 TRIM59Q8IWR1 403 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 SUGP1Q8IWZ8 645 aaKnown RBP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 REXO1L1PQ8IX06 675 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 Q8N1Y9 231 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 KREMEN2Q8NCW0 462 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 NUP43Q8NFH3 380 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 NEK11Q8NG66 645 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 NPLOC4Q8TAT6 608 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 RABGGTAQ92696 567 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 DPF3Q92784 378 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 GTF3C6Q969F1 213 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 SMARCE1Q969G3 411 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 EVI5LQ96CN4 794 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 MPHOSPH8Q99549 860 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 FUT8Q9BYC5 575 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 NAT10Q9H0A0 1025 aaKnown RBP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 PCED1AQ9H1Q7 454 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 GOLPH3LQ9H4A5 285 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 ECHDC1Q9NTX5 307 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 CWC15Q9P013 229 aaKnown RBP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 RSPH14Q9UHP6 348 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 CFAP45Q9UL16 551 aa3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 SF3B6Q9Y3B4 125 aaKnown RBP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 RBM8AQ9Y5S9 174 aaKnown RBP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 DICER1Q9UPY3 1922 aaKnown RBP3.91□□□□□ -1.78
CRNKL1-203ENST00000490258 WDR90Q96KV7 1748 aa3.9□□□□□ -1.78
CRNKL1-203ENST00000490258 LOC102724159A0A0B4J2E5 919 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 FAM237AA0A1B0GTK4 181 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ANKRD34BA5PLL1 514 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 VWA3AA6NCI4 1184 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 KLF4O43474 513 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 PFKFB2O60825 505 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ITGB3P05106 788 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 SCG5P05408 212 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CPA1P15085 419 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 SFPQP23246 707 aaKnown RBP eCLIP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 OAS2P29728 719 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CHRNA5P30532 468 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ACTN2P35609 894 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 MAGEA9P43362 315 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 MAPKAPK2P49137 400 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF143P52747 638 aaPredicted RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 TUBB4BP68371 445 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 HTRA3P83110 453 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CYP4F8P98187 520 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 KRT32Q14532 448 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 SMC1AQ14683 1233 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 PPP2R5DQ14738 602 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 NCAPHQ15003 741 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 R3HDM1Q15032 1099 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 BRD3Q15059 726 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 TCEAL1Q15170 157 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 PWP2Q15269 919 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 SLC4A8Q2Y0W8 1093 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 HLA-DQA1Q5Y7H0 255 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 EEF1DP3Q658K8 133 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 HEATR6Q6AI08 1181 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 DENND5AQ6IQ26 1287 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 FAM173BQ6P4H8 233 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CWC27Q6UX04 472 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 C6orf15Q6UXA7 325 aaPredicted RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 KSR2Q6VAB6 950 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 KIF6Q6ZMV9 814 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CCDC73Q6ZRK6 1079 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 NLRP10Q86W26 655 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 LDHDQ86WU2 507 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ERC1Q8IUD2 1116 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 TMEM139Q8IV31 216 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CCDC103Q8IW40 242 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CCAR1Q8IX12 1150 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 FBXL16Q8N461 479 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 AOPEPQ8N6M6 819 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 NECAB1Q8N987 351 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 MSANTD4Q8NCY6 345 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 BICD2Q8TD16 824 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 FRS2Q8WU20 508 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 MZB1Q8WU39 189 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ANAPC16Q96DE5 110 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 GPATCH3Q96I76 525 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 NCAPGQ9BPX3 1015 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 AGXT2Q9BYV1 514 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 TANGO6Q9C0B7 1094 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 CCDC8Q9H0W5 538 aaPredicted RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 HSD3B7Q9H2F3 369 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 GREM2Q9H772 168 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF408Q9H9D4 720 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 PDLIM7Q9NR12 457 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 BCCIPQ9P287 314 aaKnown RBP eCLIP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 DBF4Q9UBU7 674 aaPredicted RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 PRKAG3Q9UGI9 489 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 RAB21Q9UL25 225 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 NIP7Q9Y221 180 aaKnown RBP eCLIP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms