RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 METTL13Q8N6R0 699 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 ENAHQ8N8S7 591 aaPredicted RBP8.27□□□□□ -1.09
COL9A1-209ENST00000489861 ESR2Q92731 530 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 CDHR1Q96JP9 859 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 ZC3H10Q96K80 434 aaKnown RBP8.27□□□□□ -1.09
COL9A1-209ENST00000489861 SCUBE2Q9NQ36 999 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 HCFC1R1Q9NWW0 138 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 STK39Q9UEW8 545 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 MAD2L2Q9UI95 211 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 UBIAD1Q9Y5Z9 338 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 PIAS3Q9Y6X2 628 aa8.27□□□□□ -1.09
COL9A1-209ENST00000489861 UBR5O95071 2799 aaPredicted RBP8.26□□□□□ -1.09
COL9A1-209ENST00000489861 IGKV6D-21A0A0A0MT36 114 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 J3QKU1 62 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 MEIS2O14770 477 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 CCL16O15467 120 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 CYTH3O43739 400 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 ATG7O95352 703 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 C1RP00736 705 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 DARSP14868 501 aaKnown RBP8.26□□□□□ -1.09
COL9A1-209ENST00000489861 FCARP24071 287 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 SIM1P81133 766 aaPredicted RBP8.26□□□□□ -1.09
COL9A1-209ENST00000489861 SRSF1Q07955 248 aaKnown RBP eCLIP8.26□□□□□ -1.09
COL9A1-209ENST00000489861 MTMR1Q13613 665 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 UAP1L1Q3KQV9 507 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 PLK5Q496M5 336 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 ZNF484Q5JVG2 852 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 MAP4K3Q8IVH8 894 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 LINC01465Q8N7H1 131 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 MDM1Q8TC05 714 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 MCRS1Q96EZ8 462 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 MBOAT7Q96N66 472 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 DUSP15Q9H1R2 295 aaPredicted RBP8.26□□□□□ -1.09
COL9A1-209ENST00000489861 BRD9Q9H8M2 597 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 CNNM2Q9H8M5 875 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 TMEM9BQ9NQ34 198 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 JADE2Q9NQC1 790 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 CHST7Q9NS84 486 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 DIAPH3Q9NSV4 1193 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 DACT1Q9NYF0 836 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 FBXW11Q9UKB1 542 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 SSX2IPQ9Y2D8 614 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 PRG3Q9Y2Y8 225 aaPredicted RBP8.26□□□□□ -1.09
COL9A1-209ENST00000489861 PCDHB15Q9Y5E8 787 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 ATMQ13315 3056 aa8.26□□□□□ -1.09
COL9A1-209ENST00000489861 BCLAF3A2AJT9 711 aaKnown RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 PATE3B3GLJ2 98 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 TK2O00142 265 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 ZNF213O14771 459 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 EXTL3O43909 919 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 CAVIN2O95810 425 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 CCDC192P0DO97 292 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 SLC26A2P50443 739 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 PDE1AP54750 535 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 FAM193AP78312 1265 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 CREB5Q02930 508 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 SLC5A9Q2M3M2 681 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 PKN3Q6P5Z2 889 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 CCDC60Q8IWA6 550 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 SMARCC2Q8TAQ2 1214 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 RSPH1Q8WYR4 309 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 ELSPBP1Q96BH3 223 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 YTHDC1Q96MU7 727 aaKnown RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 TMEM175Q9BSA9 504 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 TRAIPQ9BWF2 469 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 KRT23Q9C075 422 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 CCDC86Q9H6F5 360 aaKnown RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 RIOX1Q9H6W3 641 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 ZNF334Q9HCZ1 680 aaPredicted RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 DNMT3BQ9UBC3 853 aaKnown RBP8.25□□□□□ -1.09
COL9A1-209ENST00000489861 POLIQ9UNA4 740 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 AKT3Q9Y243 479 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 CREBBPQ92793 2442 aa8.25□□□□□ -1.09
COL9A1-209ENST00000489861 PNMA6FA0A0J9YX94 578 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 ZNF623O75123 536 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 CCNE2O96020 404 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 POMCP01189 267 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 HNRNPA1P09651 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 GPC3P51654 580 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 TRDNQ13061 729 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 IMMTQ16891 758 aaKnown RBP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 PABPC1LQ4VXU2 614 aaKnown RBP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 PPM1LQ5SGD2 360 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 TWF2Q6IBS0 349 aaKnown RBP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 ABHD15Q6UXT9 468 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 TRMT1LQ7Z2T5 733 aaKnown RBP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 PIP4P1Q86T03 277 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 LRRC71Q8N4P6 559 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 RUFY2Q8WXA3 655 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 RILPL2Q969X0 211 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 ZSCAN10Q96SZ4 725 aaPredicted RBP8.24□□□□□ -1.09
COL9A1-209ENST00000489861 GPR62Q9BZJ7 368 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 KCNH7Q9NS40 1196 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 FAM105AQ9NUU6 356 aa8.24□□□□□ -1.09
COL9A1-209ENST00000489861 FNIP2Q9P278 1114 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms