RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PTK7Q13308 1070 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 NOLC1Q14978 699 aaKnown RBP eCLIP13.96□□□□□ -0.17
TOP3A-206ENST00000489131 SNX17Q15036 470 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
TOP3A-206ENST00000489131 SMYD5Q6GMV2 418 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
TOP3A-206ENST00000489131 RSPH3Q86UC2 560 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 CCDC112Q8NEF3 446 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 PLEKHO2Q8TD55 490 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 SH3TC2Q8TF17 1288 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 ZBTB45Q96K62 511 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-206ENST00000489131 GLT1D1Q96MS3 346 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 DNAJC7Q99615 494 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 UNC93B1Q9H1C4 597 aa13.96□□□□□ -0.17
TOP3A-206ENST00000489131 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.17
TOP3A-206ENST00000489131 A0A1W2PQ45 241 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 A0A1W2PQY0 241 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 AKR1B15C9JRZ8 316 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 B4GALT5O43286 388 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 TPM1P09493 284 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 CAPN2P17655 700 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 ARF4P18085 180 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 HOXA11P31270 313 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 HNRNPH3P31942 346 aaKnown RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 FXR1P51114 621 aaKnown RBP eCLIP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 MRPS6P82932 125 aaKnown RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 CCZ1BP86790 482 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 CCZ1P86791 482 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 RBL2Q08999 1139 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 MGAT3Q09327 533 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 KIZQ2M2Z5 673 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 TRIM71Q2Q1W2 868 aaKnown RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 SLC9C1Q4G0N8 1177 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 DCAF17Q5H9S7 520 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 FAM26DQ5JW98 314 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 C15orf39Q6ZRI6 1047 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 BRSK2Q8IWQ3 736 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 ARMC5Q96C12 935 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 SAAL1Q96ER3 474 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 FAM213AQ9BRX8 229 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 CELF4Q9BZC1 486 aaKnown RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 CRISPLD2Q9H0B8 497 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
TOP3A-206ENST00000489131 CDT1Q9H211 546 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 PDZD7Q9H5P4 517 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 AGPAT5Q9NUQ2 364 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 ZKSCAN5Q9Y2L8 839 aa13.95□□□□□ -0.18
TOP3A-206ENST00000489131 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 GOLGA8IPA6NC78 632 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 GOLGA8JA6NMD2 632 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 LRRIQ3A6PVS8 624 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 PES1O00541 588 aaKnown RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 NOL4O94818 638 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 ERLIN2O94905 339 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 RFX1P22670 979 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 PON1P27169 355 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 CASP14P31944 242 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 AP3M2P53677 418 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 DLG4P78352 724 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 ZBED6P86452 979 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 PPP3CAQ08209 521 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 SURF1Q15526 300 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 PTPN21Q16825 1174 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 EXOC3L4Q17RC7 722 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 DCAF4L1Q3SXM0 396 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 ZNF568Q3ZCX4 644 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 EPC2Q52LR7 807 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 COL13A1Q5TAT6 717 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 EEF1DP3Q658K8 133 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 GBP6Q6ZN66 633 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 FAM43BQ6ZT52 329 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 CCDC155Q8N6L0 562 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 LMO3Q8TAP4 145 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 SENP6Q9GZR1 1112 aaPredicted RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 GANQ9H2C0 597 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 TMEM8AQ9HCN3 771 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 CEP72Q9P209 647 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 ANKFY1Q9P2R3 1169 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 TRPV2Q9Y5S1 764 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
TOP3A-206ENST00000489131 SQORQ9Y6N5 450 aa13.94□□□□□ -0.18
TOP3A-206ENST00000489131 KBTBD13C9JR72 458 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 RNF225M0QZC1 329 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 TRIM49P0CI25 452 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 TRIM49CP0CI26 452 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 CCL5P13501 91 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 TRIM21P19474 475 aaKnown RBP13.93□□□□□ -0.18
TOP3A-206ENST00000489131 CDK7P50613 346 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 CDK17Q00537 523 aa13.93□□□□□ -0.18
TOP3A-206ENST00000489131 MYL7Q01449 175 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms