RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 SKAP1Q86WV1 359 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 HOMER1Q86YM7 354 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 ZNF713Q8N859 430 aaPredicted RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 FAM13CQ8NE31 585 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 TRPV1Q8NER1 839 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 MORC4Q8TE76 937 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 NSUN6Q8TEA1 469 aaKnown RBP5.88□□□□□ -1.47
SF3A3-207ENST00000488934 CLEC4DQ8WXI8 215 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 MTMR8Q96EF0 704 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 GLT1D1Q96MS3 346 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 IWS1Q96ST2 819 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 SEZ6LQ9BYH1 1024 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 AP5M1Q9H0R1 490 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 RIOX1Q9H6W3 641 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 JMJD4Q9H9V9 463 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 VAT1LQ9HCJ6 419 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 LMCD1Q9NZU5 365 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 Q9Y3F1 56 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 PCDHA1Q9Y5I3 950 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 U3KQE9 123 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 MROH7Q68CQ1 1323 aa5.88□□□□□ -1.47
SF3A3-207ENST00000488934 FAM221AA4D161 298 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 ZBTB43O43298 467 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 STAM2O75886 525 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CABYRO75952 493 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 SNAI1O95863 264 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CBX7O95931 251 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CFBP00751 764 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 C6orf222P0C671 652 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 EDNRBP24530 442 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CPT1AP50416 773 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 HSD17B4P51659 736 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 GJA9P57773 515 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 NKX3-2P78367 333 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 ZP2Q05996 745 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 LRRC41Q15345 812 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 STXBP2Q15833 593 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 TMEM201Q5SNT2 666 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 PRAMEF19Q5SWL8 479 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 GJC2Q5T442 439 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 ARHGEF16Q5VV41 709 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 KCNV1Q6PIU1 500 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 APOA5Q6Q788 366 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 SLC30A10Q6XR72 485 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 NOL8Q76FK4 1167 aaKnown RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 TLK2Q86UE8 772 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 MICU3Q86XE3 530 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 WFDC3Q8IUB2 231 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 FBXL16Q8N461 479 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 FANCBQ8NB91 859 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 GOLM1Q8NBJ4 401 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 PIWIL2Q8TC59 973 aaKnown RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 DIS3LQ8TF46 1054 aaKnown RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 SCFD2Q8WU76 684 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CYB5D2Q8WUJ1 264 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CUL5Q93034 780 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 ACSF2Q96CM8 615 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 FGD4Q96M96 766 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 JAKMIP1Q96N16 626 aaKnown RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 DPH2Q9BQC3 489 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 SENP6Q9GZR1 1112 aaPredicted RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 UPF3AQ9H1J1 476 aaKnown RBP5.87□□□□□ -1.47
SF3A3-207ENST00000488934 EHMT1Q9H9B1 1298 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 TAF6LQ9Y6J9 622 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 CAPN6Q9Y6Q1 641 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 SYNRGQ9UMZ2 1314 aa5.87□□□□□ -1.47
SF3A3-207ENST00000488934 NID2Q14112 1375 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 ELP1O95163 1332 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 KLF18A0A0U1RQI7 1052 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 A0A1W2PPC1 479 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 CYTH3O43739 400 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 PGK1P00558 417 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 POLR2MP0CAP2 368 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 CD96P40200 585 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 METAP2P50579 478 aaKnown RBP eCLIP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 ACLYP53396 1101 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 ANAPC15P60006 121 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 EXOSC10Q01780 885 aaKnown RBP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 FAM160A1Q05DH4 1040 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 MRPL58Q14197 206 aaKnown RBP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 SNX17Q15036 470 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 DUSP28Q4G0W2 176 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 ANO1Q5XXA6 986 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 MCTP2Q6DN12 878 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 TMTC3Q6ZXV5 915 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 EEPD1Q7L9B9 569 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 ERMP1Q7Z2K6 904 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 REC114Q7Z4M0 266 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 FBXO16Q8IX29 292 aaPredicted RBP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 C7orf61Q8IZ16 206 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 SMARCC2Q8TAQ2 1214 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 CCDC12Q8WUD4 166 aaPredicted RBP5.86□□□□□ -1.47
SF3A3-207ENST00000488934 HSPA12BQ96MM6 686 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 PIGSQ96S52 555 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 RMDN3Q96TC7 470 aa5.86□□□□□ -1.47
SF3A3-207ENST00000488934 WDR11Q9BZH6 1224 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms