RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 KIFC3Q9BVG8 833 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 EMILIN2Q9BXX0 1053 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 RAB34Q9BZG1 259 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 PDZD7Q9H5P4 517 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 MRPL17Q9NRX2 175 aaKnown RBP13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 MARCH5Q9NX47 278 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 DNM3Q9UQ16 869 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 HCN4Q9Y3Q4 1203 aa13.19□□□□□ -0.3
CCHCR1-215ENST00000488920 E9PMD0 336 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 H3BQV1 296 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 LAD1O00515 517 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 LILRB3O75022 631 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 NR1I2O75469 434 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 PRKCBP05771 671 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 NAMPTP43490 491 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 ITIH3Q06033 890 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 ZRSR1Q15695 479 aaKnown RBP13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 KRT79Q5XKE5 535 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 CABP7Q86V35 215 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 EDAQ92838 391 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 COLEC11Q9BWP8 271 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 CCDC113Q9H0I3 377 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
CCHCR1-215ENST00000488920 ACKR2O00590 384 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 N4BP3O15049 544 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 SOD2P04179 222 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 EDN1P05305 212 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 PRPHP41219 470 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 MCM2P49736 904 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 RILPL1Q5EBL4 403 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 TMC5Q6UXY8 1006 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 FEZF2Q8TBJ5 459 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 KIFAP3Q92845 792 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 FBXL18Q96ME1 805 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 CXCL16Q9H2A7 254 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 POMKQ9H5K3 350 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 DZANK1Q9NVP4 752 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 CACNG4Q9UBN1 327 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 ARID2Q68CP9 1835 aa13.17□□□□□ -0.3
CCHCR1-215ENST00000488920 CCDC169A6NNP5 214 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 EFEMP2O95967 443 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 URODP06132 367 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 MYBP10242 640 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 MTHFRP42898 656 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 CLCN4P51793 760 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 EFNA5P52803 228 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 PEX3P56589 373 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 ZXDAP98168 799 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 GRIK3Q13003 919 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 ATAT1Q5SQI0 421 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 HFE2Q6ZVN8 426 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 KCNK18Q7Z418 384 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 FAM122AQ96E09 287 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 B3GALT6Q96L58 329 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 RIPOR3Q96MK2 946 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 RPS6KC1Q96S38 1066 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 PLIN2Q99541 437 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 RUSC1Q9BVN2 902 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
CCHCR1-215ENST00000488920 VWA3AA6NCI4 1184 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 SFI1A8K8P3 1242 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 K7ERI5 159 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 TEX28O15482 410 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 HIP1RO75146 1068 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 TADA2AO75478 443 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 RECQL4O94761 1208 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 NPTX2P47972 431 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 GLUD2P49448 558 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 ATP2C1P98194 919 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 LARP1BQ659C4 914 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 RINT1Q6NUQ1 792 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 TRIM67Q6ZTA4 783 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 RNF168Q8IYW5 571 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 DAW1Q8N136 415 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 PAAF1Q9BRP4 392 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 GDAQ9Y2T3 454 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 NR2E1Q9Y466 385 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 TRIOO75962 3097 aa13.15□□□□□ -0.3
CCHCR1-215ENST00000488920 TMEM221A6NGB7 291 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms