RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 EPB41L4AQ9HCS5 686 aaPredicted RBP5.88□□□□□ -1.47
SRRM1-215ENST00000488317 GCM1Q9NP62 436 aa5.88□□□□□ -1.47
SRRM1-215ENST00000488317 NLRC4Q9NPP4 1024 aa5.88□□□□□ -1.47
SRRM1-215ENST00000488317 LMBRD1Q9NUN5 540 aa5.88□□□□□ -1.47
SRRM1-215ENST00000488317 KLHL11Q9NVR0 708 aa5.88□□□□□ -1.47
SRRM1-215ENST00000488317 RTEL1Q9NZ71 1219 aa5.88□□□□□ -1.47
SRRM1-215ENST00000488317 RBM8AQ9Y5S9 174 aaKnown RBP5.88□□□□□ -1.47
SRRM1-215ENST00000488317 PLA2G1BP04054 148 aaKnown RBP5.87□□□□□ -1.47
SRRM1-215ENST00000488317 SLC5A1P13866 664 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 SMARCA1P28370 1054 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 HTR3AP46098 478 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 MRE11P49959 708 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 HK3P52790 923 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 RRADP55042 308 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 GJA9P57773 515 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 IFIT5Q13325 482 aaKnown RBP5.87□□□□□ -1.47
SRRM1-215ENST00000488317 FGL2Q14314 439 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 MST1LQ2TV78 715 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 CNKSR3Q6P9H4 555 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 LARP4Q71RC2 724 aaKnown RBP eCLIP5.87□□□□□ -1.47
SRRM1-215ENST00000488317 MAEAQ7L5Y9 396 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 HEATR3Q7Z4Q2 680 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 PLA2G15Q8NCC3 412 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 FNIP1Q8TF40 1166 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 GJA10Q969M2 543 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 TBCBQ99426 244 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 PDCD2LQ9BRP1 358 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 TMEM168Q9H0V1 697 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 NUP62CLQ9H1M0 184 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 LDAHQ9H6V9 325 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 C14orf93Q9H972 538 aaKnown RBP5.87□□□□□ -1.47
SRRM1-215ENST00000488317 SPATA6Q9NWH7 488 aaPredicted RBP5.87□□□□□ -1.47
SRRM1-215ENST00000488317 ING3Q9NXR8 418 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 STAP2Q9UGK3 403 aa5.87□□□□□ -1.47
SRRM1-215ENST00000488317 MYBBP1AQ9BQG0 1328 aaKnown RBP5.86□□□□□ -1.47
SRRM1-215ENST00000488317 A0A088AWK7 358 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 KLHL18O94889 574 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 ARIH2O95376 493 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 ZNF28P17035 718 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 RPL13P26373 211 aaKnown RBP5.86□□□□□ -1.47
SRRM1-215ENST00000488317 SERPINB3P29508 390 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 PTPN7P35236 360 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 SLC6A9P48067 706 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 RAB1AP62820 205 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 TARDBPQ13148 414 aaKnown RBP eCLIP5.86□□□□□ -1.47
SRRM1-215ENST00000488317 PRR31Q5SQ13 230 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 KRT40Q6A162 431 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 TRIM68Q6AZZ1 485 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 TSHZ1Q6ZSZ6 1077 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 Q6ZUG5 572 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 CLEC14AQ86T13 490 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 TMEFF1Q8IYR6 380 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 OR7D4Q8NG98 312 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 STON2Q8WXE9 905 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 HOXB13Q92826 284 aaPredicted RBP5.86□□□□□ -1.47
SRRM1-215ENST00000488317 CYFIP2Q96F07 1278 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 IL17RAQ96F46 866 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 SLC35A4Q96G79 324 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 PWWP2AQ96N64 755 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 NT5C1BQ96P26 610 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 CARD11Q9BXL7 1154 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 BCO1Q9HAY6 547 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 LANCL2Q9NS86 450 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 TMEM140Q9NV12 185 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 PNPOQ9NVS9 261 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 GPRC5DQ9NZD1 345 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 ABCF2Q9UG63 623 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 TPCN1Q9ULQ1 816 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 SIK3Q9Y2K2 1263 aa5.86□□□□□ -1.47
SRRM1-215ENST00000488317 C2orf78A6NCI8 922 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 ETV2O00321 342 aaPredicted RBP5.85□□□□□ -1.47
SRRM1-215ENST00000488317 SREBF1P36956 1147 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 KIR2DL3P43628 341 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 WNT3AP56704 352 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 DUSP2Q05923 314 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 RAB39AQ14964 217 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 SWSAP1Q6NVH7 229 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 C1orf228Q6PIY5 440 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 TOGARAM2Q6ZUX3 1019 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 SKAP1Q86WV1 359 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 COL23A1Q86Y22 540 aaPredicted RBP5.85□□□□□ -1.47
SRRM1-215ENST00000488317 VPS37AQ8NEZ2 397 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 FBXO18Q8NFZ0 1043 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 PLBD2Q8NHP8 589 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 FAM167AQ96KS9 214 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 CCDC138Q96M89 665 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 KIAA1683Q9H0B3 1180 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 BARX1Q9HBU1 254 aaPredicted RBP5.85□□□□□ -1.47
SRRM1-215ENST00000488317 CNNM1Q9NRU3 951 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 NTMQ9P121 344 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 CALCOCO1Q9P1Z2 691 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 CPA4Q9UI42 421 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 DMTF1Q9Y222 760 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 ZDHHC9Q9Y397 364 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 SNX13Q9Y5W8 968 aa5.85□□□□□ -1.47
SRRM1-215ENST00000488317 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.85□□□□□ -1.47
SRRM1-215ENST00000488317 A0A1W2PPL8 197 aa5.84□□□□□ -1.47
SRRM1-215ENST00000488317 RHPN2P1A8MT19 583 aa5.84□□□□□ -1.47
SRRM1-215ENST00000488317 IFRD1O00458 451 aaPredicted RBP5.84□□□□□ -1.47
SRRM1-215ENST00000488317 GPR32O75388 356 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms