RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 TEX28O15482 410 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 BRD1O95696 1058 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 CYP11B2P19099 503 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 NHLH1Q02575 133 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 EEF1DP3Q658K8 133 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 SLC27A1Q6PCB7 646 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 PADI6Q6TGC4 694 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 CABP7Q86V35 215 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 KREMEN2Q8NCW0 462 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 NACC1Q96RE7 527 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 RPS6KC1Q96S38 1066 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 PHOX2BQ99453 314 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 TRIM6Q9C030 488 aaPredicted RBP12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 CCDC113Q9H0I3 377 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 PDZD7Q9H5P4 517 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 UBN1Q9NPG3 1134 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 MRPL17Q9NRX2 175 aaKnown RBP12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 DZANK1Q9NVP4 752 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 PCDHB6Q9Y5E3 794 aa12.43□□□□□ -0.42
PCYT1A-215ENST00000488235 PTGESO14684 152 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 SPATA31D3P0C874 917 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 U2AF2P26368 475 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 KLRC2P26717 231 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 CDC25AP30304 524 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 MTHFRP42898 656 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 HMGN5P82970 282 aaKnown RBP12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 SIGLEC14Q08ET2 396 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 GIT2Q14161 759 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 FAM187BQ17R55 369 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 SPATA31D4Q6ZUB0 917 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 GPR149Q86SP6 731 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 TMEM87AQ8NBN3 555 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 MCPH1Q8NEM0 835 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 NECTIN4Q96NY8 510 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 BHMT2Q9H2M3 363 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 MAN1C1Q9NR34 630 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 CHST7Q9NS84 486 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 SNTG2Q9NY99 539 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 LIMD1Q9UGP4 676 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 MYO10Q9HD67 2058 aa12.42□□□□□ -0.42
PCYT1A-215ENST00000488235 ARHGEF35A5YM69 484 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 CARNS1A5YM72 827 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 CASTOR2A6NHX0 329 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 RFPL2O75678 378 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 RECQL4O94761 1208 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 PRKCBP05771 671 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 URODP06132 367 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 RPL17P18621 184 aaKnown RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 LIG1P18858 919 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 CCT6AP40227 531 aaKnown RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 GLUD2P49448 558 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 PLXNA3P51805 1871 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 DSG1Q02413 1049 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 PTGDRQ13258 359 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 ORC2Q13416 577 aaPredicted RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 NAB2Q15742 525 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 NT5DC1Q5TFE4 455 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 FUT10Q6P4F1 479 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 DENND4AQ7Z401 1863 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 KCNK18Q7Z418 384 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 ALYREFQ86V81 257 aaKnown RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 PPFIBP1Q86W92 1011 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 DAW1Q8N136 415 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 FAM184AQ8NB25 1140 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 HASPINQ8TF76 798 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 ZSCAN31Q96LW9 406 aaPredicted RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 RIPOR3Q96MK2 946 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 MMTAG2Q9BU76 263 aaKnown RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 EMILIN2Q9BXX0 1053 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 RXFP1Q9HBX9 757 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 SH2B1Q9NRF2 756 aaPredicted RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 PRMT7Q9NVM4 692 aaPredicted RBP12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 KIAA1024Q9UPX6 916 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
PCYT1A-215ENST00000488235 KMT2EQ8IZD2 1858 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 C2orf16Q68DN1 1984 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 E9PMD0 336 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 KIF4AO95239 1232 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 TCF15Q12870 199 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 GRIK3Q13003 919 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 PRPF4BQ13523 1007 aaKnown RBP12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 RTP2Q5QGT7 225 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 ATAT1Q5SQI0 421 aa12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
PCYT1A-215ENST00000488235 GLYCTKQ8IVS8 523 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms