RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PCDHGA9Q9Y5G4 932 aaKnown RBP5.42□□□□□ -1.54
TTC3-220ENST00000487711 PCDHGA8Q9Y5G5 932 aa5.42□□□□□ -1.54
TTC3-220ENST00000487711 PCDHGA7Q9Y5G6 932 aa5.42□□□□□ -1.54
TTC3-220ENST00000487711 PCDHGA6Q9Y5G7 932 aa5.42□□□□□ -1.54
TTC3-220ENST00000487711 PCDHGA3Q9Y5H0 932 aa5.42□□□□□ -1.54
TTC3-220ENST00000487711 ZMYM3Q14202 1370 aa5.42□□□□□ -1.54
TTC3-220ENST00000487711 FZD9O00144 591 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 ADCY6O43306 1168 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 C5AR1P21730 350 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 KRT85P78386 507 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 MGAT2Q10469 447 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 CDSNQ15517 529 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 SPDYAQ5MJ70 313 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 EFCAB2Q5VUJ9 269 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 Q6ZVL8 140 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 APBB1IPQ7Z5R6 666 aaPredicted RBP5.41□□□□□ -1.54
TTC3-220ENST00000487711 OR7D4Q8NG98 312 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 NRG4Q8WWG1 115 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 ATXN2LQ8WWM7 1075 aaKnown RBP5.41□□□□□ -1.54
TTC3-220ENST00000487711 ST8SIA2Q92186 375 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 DPF2Q92785 391 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 BORCS6Q96GS4 357 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 TEKT5Q96M29 485 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 SLC13A1Q9BZW2 595 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 HECAQ9UBI9 543 aaPredicted RBP5.41□□□□□ -1.54
TTC3-220ENST00000487711 TRPS1Q9UHF7 1281 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 INTUQ9ULD6 942 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 GIT1Q9Y2X7 761 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 TESMINQ9Y4I5 508 aa5.41□□□□□ -1.54
TTC3-220ENST00000487711 FAM171A2A8MVW0 826 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 ENDOD1O94919 500 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
TTC3-220ENST00000487711 PDGFRBP09619 1106 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 HSP90B1P14625 803 aaKnown RBP5.4□□□□□ -1.54
TTC3-220ENST00000487711 SLC16A1P53985 500 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 CNGB1Q14028 1251 aaPredicted RBP5.4□□□□□ -1.54
TTC3-220ENST00000487711 PRAMEF14Q5SWL7 426 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 FAM83AQ86UY5 434 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 ZBTB46Q86UZ6 589 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 XYLT1Q86Y38 959 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 REPS2Q8NFH8 660 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 FBXO18Q8NFZ0 1043 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 STAG1Q8WVM7 1258 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 PGBD4Q96DM1 585 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 TUBD1Q9UJT1 453 aa5.4□□□□□ -1.54
TTC3-220ENST00000487711 PRR5-ARHGAP8B1AHC4 643 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 HK1P19367 917 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 ACRV1P26436 265 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 RECQLP46063 649 aaPredicted RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 MAN2A2P49641 1150 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 NEK2P51955 445 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 ODF1Q14990 250 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 SEPT2Q15019 361 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 USP39Q53GS9 565 aaKnown RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 Q6ZRM9 215 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 TRMT2AQ8IZ69 625 aaKnown RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 MDGA1Q8NFP4 955 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 SH3RF3Q8TEJ3 882 aaPredicted RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 HOXB13Q92826 284 aaPredicted RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 CHMP4CQ96CF2 233 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 CEP95Q96GE4 821 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 C7orf25Q9BPX7 421 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 GPR87Q9BY21 358 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 SENP6Q9GZR1 1112 aaPredicted RBP5.39□□□□□ -1.55
TTC3-220ENST00000487711 LDAHQ9H6V9 325 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 LANCL2Q9NS86 450 aa5.39□□□□□ -1.55
TTC3-220ENST00000487711 ALDH1L1O75891 902 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 INSRRP14616 1297 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 SREBF1P36956 1147 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 SCNN1GP51170 649 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 RRP1BQ14684 758 aaKnown RBP5.38□□□□□ -1.55
TTC3-220ENST00000487711 UAP1L1Q3KQV9 507 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 NRN1LQ496H8 165 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 MFSD14BQ5SR56 506 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 DOK3Q7L591 496 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 RHOT1Q8IXI2 618 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 OR2I1PQ8NGU4 316 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.38□□□□□ -1.55
TTC3-220ENST00000487711 EXTL1Q92935 676 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 PDCD2LQ9BRP1 358 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 LSM14BQ9BX40 385 aaKnown RBP5.38□□□□□ -1.55
TTC3-220ENST00000487711 MANSC1Q9H8J5 431 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 SPON1Q9HCB6 807 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 AASDHPPTQ9NRN7 309 aa5.38□□□□□ -1.55
TTC3-220ENST00000487711 AURKAIP1Q9NWT8 199 aaPredicted RBP5.38□□□□□ -1.55
TTC3-220ENST00000487711 LUC7L2Q9Y383 392 aaKnown RBP5.38□□□□□ -1.55
TTC3-220ENST00000487711 GOLGA6L6A8MZA4 724 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 B5MCH6 92 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 C1QTNF3-AMACRE9PGA6 284 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 IL2RBP14784 551 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 WASP42768 502 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 FLT3LGP49771 235 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 DCAF17Q5H9S7 520 aaPredicted RBP5.37□□□□□ -1.55
TTC3-220ENST00000487711 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 C1orf210Q8IVY1 113 aa5.37□□□□□ -1.55
TTC3-220ENST00000487711 ANKRD13AQ8IZ07 590 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms