RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 LY9Q9HBG7 655 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 AGO4Q9HCK5 861 aaKnown RBP13.22□□□□□ -0.29
TRIM56-204ENST00000487252 ACACAQ13085 2346 aa13.22□□□□□ -0.29
TRIM56-204ENST00000487252 ZNF462Q96JM2 2506 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 EIF4E1BA6NMX2 242 aaKnown RBP13.21□□□□□ -0.29
TRIM56-204ENST00000487252 AKAP3O75969 853 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 TMOD1P28289 359 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 DSC1Q08554 894 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 C19orf57Q0VDD7 668 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 TWF2Q6IBS0 349 aaKnown RBP13.21□□□□□ -0.29
TRIM56-204ENST00000487252 MRPL10Q7Z7H8 261 aaKnown RBP13.21□□□□□ -0.29
TRIM56-204ENST00000487252 LRRC71Q8N4P6 559 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 EVI5LQ96CN4 794 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 UBAC1Q9BSL1 405 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.29
TRIM56-204ENST00000487252 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
TRIM56-204ENST00000487252 ASCC3Q8N3C0 2202 aaKnown RBP13.21□□□□□ -0.29
TRIM56-204ENST00000487252 APC2O95996 2303 aa13.21□□□□□ -0.3
TRIM56-204ENST00000487252 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 LNP1A1A4G5 178 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 F8W810 466 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 CDX4O14627 284 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-204ENST00000487252 RPP40O75818 363 aaKnown RBP13.2□□□□□ -0.3
TRIM56-204ENST00000487252 C1QL1O75973 258 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 CREMQ03060 361 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 KIAA1211LQ6NV74 962 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 SWSAP1Q6NVH7 229 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 IRF7Q92985 503 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 PGBD4Q96DM1 585 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 FAM193BQ96PV7 902 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-204ENST00000487252 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
TRIM56-204ENST00000487252 PRG3Q9Y2Y8 225 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-204ENST00000487252 PIAS3Q9Y6X2 628 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 CACNA1EQ15878 2313 aa13.2□□□□□ -0.3
TRIM56-204ENST00000487252 CNTNAP2Q9UHC6 1331 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
TRIM56-204ENST00000487252 ARNTLO00327 626 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 DHX15O43143 795 aaKnown RBP13.19□□□□□ -0.3
TRIM56-204ENST00000487252 XYLBO75191 536 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 C8AP07357 584 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 PLA2G2AP14555 144 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 RPL17P18621 184 aaKnown RBP13.19□□□□□ -0.3
TRIM56-204ENST00000487252 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
TRIM56-204ENST00000487252 Q6ZS52 159 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 GLYCTKQ8IVS8 523 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 GPR62Q9BZJ7 368 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 BRD9Q9H8M2 597 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 RSAD1Q9HA92 442 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 AVENQ9NQS1 362 aaPredicted RBP13.19□□□□□ -0.3
TRIM56-204ENST00000487252 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 SPTA1P02549 2419 aa13.19□□□□□ -0.3
TRIM56-204ENST00000487252 MEIS1O00470 390 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 NRG2O14511 850 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 CCL16O15467 120 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 POMCP01189 267 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 MX1P20591 662 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 AAMPQ13685 434 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 LRRC32Q14392 662 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 GRM2Q14416 872 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 SLC5A9Q2M3M2 681 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 LARP1BQ659C4 914 aaKnown RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 MIS18BP1Q6P0N0 1132 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 TRMT61BQ9BVS5 477 aaKnown RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 SPZ1Q9BXG8 430 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 KRT23Q9C075 422 aa13.18□□□□□ -0.3
TRIM56-204ENST00000487252 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 RBM12Q9NTZ6 932 aaKnown RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 PIN4Q9Y237 131 aaKnown RBP13.18□□□□□ -0.3
TRIM56-204ENST00000487252 NUP205Q92621 2012 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 SPDYE3A6NKU9 549 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 TK2O00142 265 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 SFPQP23246 707 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRIM56-204ENST00000487252 CCNE1P24864 410 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 FGD1P98174 961 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-204ENST00000487252 UBE2SQ16763 222 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 PLK5Q496M5 336 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 LIN9Q5TKA1 542 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 PIBF1Q8WXW3 757 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 MSANTD3Q96H12 275 aa13.17□□□□□ -0.3
TRIM56-204ENST00000487252 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms