RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 LRFN3Q9BTN0 628 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 BHMT2Q9H2M3 363 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 GREM2Q9H772 168 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 NGRNQ9NPE2 291 aaKnown RBP4.99□□□□□ -1.61
PTCD3-216ENST00000487043 KLHL11Q9NVR0 708 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 KCMF1Q9P0J7 381 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 ARHGAP20Q9P2F6 1191 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 ITSN2Q9NZM3 1697 aa4.99□□□□□ -1.61
PTCD3-216ENST00000487043 ZNF644Q9H582 1327 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-216ENST00000487043 PLCH2O75038 1416 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 CDC42BPAQ5VT25 1732 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 NRP2O60462 931 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 FOSP01100 380 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-216ENST00000487043 SLC5A1P13866 664 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 SYN1P17600 705 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 NRG3P56975 720 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 GJA9P57773 515 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 IL13RA1P78552 427 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 CD83Q01151 205 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 MGAT5Q09328 741 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 ZRSR2Q15696 482 aaKnown RBP4.98□□□□□ -1.61
PTCD3-216ENST00000487043 CCDC157Q569K6 752 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 RNF220Q5VTB9 566 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 DAAM2Q86T65 1068 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 STK32CQ86UX6 486 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 TMEM151BQ8IW70 566 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 FAM186BQ8IYM0 893 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 DTX3Q8N9I9 347 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 MYD88Q99836 296 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 SYT3Q9BQG1 590 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 ZNF552Q9H707 407 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-216ENST00000487043 PPCSQ9HAB8 311 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 PTPRHQ9HD43 1115 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 NLRC4Q9NPP4 1024 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 DLL4Q9NR61 685 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTCD3-216ENST00000487043 SCOCQ9UIL1 159 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 SYNPO2Q9UMS6 1093 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 PCDHA13Q9Y5I0 950 aa4.98□□□□□ -1.61
PTCD3-216ENST00000487043 MAPKBP1O60336 1514 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 A0A0G2JLL6 359 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 CAPN8A6NHC0 703 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ABLIM1O14639 778 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 CUTAO60888 179 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 IL18BPO95998 194 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 FTLP02792 175 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 C8BP07358 591 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 MC3RP41968 323 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 WASP42768 502 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ANTXR2P58335 489 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 YBX1P67809 324 aaKnown RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 PPP3CAQ08209 521 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 SEMA5AQ13591 1074 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 NFIXQ14938 502 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 CNN3Q15417 329 aaKnown RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 DGKDQ16760 1214 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 GRAMD1BQ3KR37 738 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ANO6Q4KMQ2 910 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 CCDC178Q5BJE1 867 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 KANK2Q63ZY3 851 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 C1orf228Q6PIY5 440 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 LMBR1LQ6UX01 489 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 TOGARAM2Q6ZUX3 1019 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 BMP8AQ7Z5Y6 402 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 COL23A1Q86Y22 540 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 GLB1L2Q8IW92 636 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 KIAA0319LQ8IZA0 1049 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 STPG3Q8N7X2 389 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ACRBPQ8NEB7 543 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 OR5AN1Q8NGI8 311 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 OR2I1PQ8NGU4 316 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ZSWIM3Q96MP5 696 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 KCNC2Q96PR1 638 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 TBCBQ99426 244 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 FDXACB1Q9BRP7 624 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 PLCB1Q9NQ66 1216 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 KMT5AQ9NQR1 393 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 RBM12Q9NTZ6 932 aaKnown RBP4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ZFP69BQ9UJL9 534 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 L1RE1Q9UN81 338 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 DMTF1Q9Y222 760 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 POLHQ9Y253 713 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 STXBP5LQ9Y2K9 1186 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 NR2E3Q9Y5X4 410 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 CDC42BPBQ9Y5S2 1711 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ABCA9Q8IUA7 1624 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 ARAP3Q8WWN8 1544 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 PTPRKQ15262 1439 aa4.97□□□□□ -1.61
PTCD3-216ENST00000487043 TTC37Q6PGP7 1564 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 CAMSAP2Q08AD1 1489 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 A0A0A6YYK5 440 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-216ENST00000487043 CFAP69A5D8W1 941 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 GOLIM4O00461 696 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 AKR1B10O60218 316 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 SASH1O94885 1247 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 TSPY4P0CV99 314 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 TSPY10P0CW01 314 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 NCAM1P13591 858 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 PEX2P28328 305 aa4.96□□□□□ -1.62
PTCD3-216ENST00000487043 VIPR1P32241 457 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms