RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 IARSP41252 1262 aaKnown RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 PIN1Q13526 163 aaPredicted RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 C1QL3Q5VWW1 255 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 NAIF1Q69YI7 327 aaPredicted RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 PGM2L1Q6PCE3 622 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 APBB1IPQ7Z5R6 666 aaPredicted RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 MRGPREQ86SM8 312 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 PNMA8AQ86V59 439 aaPredicted RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 ZNF575Q86XF7 245 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 SYNE4Q8N205 404 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 ZNF276Q8N554 614 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 ST8SIA2Q92186 375 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 RTF1Q92541 710 aaKnown RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 LENG9Q96B70 501 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 PGBD4Q96DM1 585 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 HOOK2Q96ED9 719 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 FUBP3Q96I24 572 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMC4-218ENST00000486711 NOL10Q9BSC4 688 aaKnown RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 POFUT1Q9H488 388 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 TOPORSQ9NS56 1045 aaPredicted RBP6.04□□□□□ -1.44
SMC4-218ENST00000486711 MKS1Q9NXB0 559 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 TRPS1Q9UHF7 1281 aa6.04□□□□□ -1.44
SMC4-218ENST00000486711 TNKSO95271 1327 aa6.03□□□□□ -1.44
SMC4-218ENST00000486711 PPFIA4O75335 1185 aa6.03□□□□□ -1.44
SMC4-218ENST00000486711 CT47B1P0C2W7 299 aaPredicted RBP6.03□□□□□ -1.44
SMC4-218ENST00000486711 RAB27AP51159 221 aa6.03□□□□□ -1.44
SMC4-218ENST00000486711 NFE2Q16621 373 aaPredicted RBP6.03□□□□□ -1.44
SMC4-218ENST00000486711 LAIR1Q6GTX8 287 aa6.03□□□□□ -1.44
SMC4-218ENST00000486711 ESPNLQ6ZVH7 1005 aa6.03□□□□□ -1.44
SMC4-218ENST00000486711 ZIM2Q9NZV7 527 aa6.03□□□□□ -1.44
SMC4-218ENST00000486711 AKAP10O43572 662 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 CLUL1Q15846 466 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 WDR75Q8IWA0 830 aaKnown RBP6.02□□□□□ -1.45
SMC4-218ENST00000486711 RAVER1Q8IY67 606 aaKnown RBP6.02□□□□□ -1.45
SMC4-218ENST00000486711 UNC5BQ8IZJ1 945 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 CBARPQ8N350 705 aaPredicted RBP6.02□□□□□ -1.45
SMC4-218ENST00000486711 C1orf162Q8NEQ5 155 aaPredicted RBP6.02□□□□□ -1.45
SMC4-218ENST00000486711 FERMT2Q96AC1 680 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 FAXDC2Q96IV6 333 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 CRAMP1Q96RY5 1269 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 SLC13A1Q9BZW2 595 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 MS4A5Q9H3V2 200 aa6.02□□□□□ -1.45
SMC4-218ENST00000486711 A0A0A6YYK5 440 aaPredicted RBP6.01□□□□□ -1.45
SMC4-218ENST00000486711 ST20-MTHFSA0A0A6YYL1 179 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 TSPAN6O43657 245 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 GAAP10253 952 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 FSTL1Q12841 308 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 INAVAQ3KP66 663 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 UNQ6494/PRO21346Q6UXR6 183 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 RHOUQ7L0Q8 258 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 CHPFQ8IZ52 775 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 PPP1R14CQ8TAE6 165 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 LMBR1Q8WVP7 490 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 SOX7Q9BT81 388 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 ZNF180Q9UJW8 692 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 FZD1Q9UP38 647 aa6.01□□□□□ -1.45
SMC4-218ENST00000486711 LUC7L2Q9Y383 392 aaKnown RBP6.01□□□□□ -1.45
SMC4-218ENST00000486711 MYPNQ86TC9 1320 aa6□□□□□ -1.45
SMC4-218ENST00000486711 LCHNA4D1U4 455 aa6□□□□□ -1.45
SMC4-218ENST00000486711 GRXCR1A8MXD5 290 aa6□□□□□ -1.45
SMC4-218ENST00000486711 TRIM24O15164 1050 aa6□□□□□ -1.45
SMC4-218ENST00000486711 XPOTO43592 962 aaKnown RBP6□□□□□ -1.45
SMC4-218ENST00000486711 STC2O76061 302 aa6□□□□□ -1.45
SMC4-218ENST00000486711 RECQL4O94761 1208 aa6□□□□□ -1.45
SMC4-218ENST00000486711 ALDH1A2O94788 518 aa6□□□□□ -1.45
SMC4-218ENST00000486711 SCGB1D2O95969 90 aa6□□□□□ -1.45
SMC4-218ENST00000486711 RBP3P10745 1247 aa6□□□□□ -1.45
SMC4-218ENST00000486711 RECQLP46063 649 aaPredicted RBP6□□□□□ -1.45
SMC4-218ENST00000486711 KRT85P78386 507 aa6□□□□□ -1.45
SMC4-218ENST00000486711 PDCD1Q15116 288 aa6□□□□□ -1.45
SMC4-218ENST00000486711 LY6G5CQ5SRR4 150 aa6□□□□□ -1.45
SMC4-218ENST00000486711 CXorf67Q86X51 503 aaPredicted RBP6□□□□□ -1.45
SMC4-218ENST00000486711 CMIPQ8IY22 773 aa6□□□□□ -1.45
SMC4-218ENST00000486711 CDYL2Q8N8U2 506 aa6□□□□□ -1.45
SMC4-218ENST00000486711 ZNF496Q96IT1 587 aaPredicted RBP6□□□□□ -1.45
SMC4-218ENST00000486711 CAMKK2Q96RR4 588 aa6□□□□□ -1.45
SMC4-218ENST00000486711 PDCD2LQ9BRP1 358 aa6□□□□□ -1.45
SMC4-218ENST00000486711 PCGF6Q9BYE7 350 aa6□□□□□ -1.45
SMC4-218ENST00000486711 CDH19Q9H159 772 aa6□□□□□ -1.45
SMC4-218ENST00000486711 WNT8AQ9H1J5 351 aa6□□□□□ -1.45
SMC4-218ENST00000486711 ING3Q9NXR8 418 aa6□□□□□ -1.45
SMC4-218ENST00000486711 IP6K2Q9UHH9 426 aa6□□□□□ -1.45
SMC4-218ENST00000486711 SORCS3Q9UPU3 1222 aa6□□□□□ -1.45
SMC4-218ENST00000486711 PCDHB6Q9Y5E3 794 aa6□□□□□ -1.45
SMC4-218ENST00000486711 KLHL33A6NCF5 533 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 TRIM75PA6NK02 468 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 HOXA3O43365 443 aaPredicted RBP5.99□□□□□ -1.45
SMC4-218ENST00000486711 RHOBTB3O94955 611 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 PCDH8O95206 1070 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 ITGB1P05556 798 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
SMC4-218ENST00000486711 HK1P19367 917 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 ENPP1P22413 925 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 GPR3P46089 330 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 ACAP2Q15057 778 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 PTPAQ15257 358 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 PCBP2Q15366 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMC4-218ENST00000486711 FSCN1Q16658 493 aaKnown RBP5.99□□□□□ -1.45
SMC4-218ENST00000486711 UGT8Q16880 541 aa5.99□□□□□ -1.45
SMC4-218ENST00000486711 METTL24Q5JXM2 366 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms