RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 THEGQ9P2T0 379 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 CTNND2Q9UQB3 1225 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 SLC4A7Q9Y6M7 1214 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 SQORQ9Y6N5 450 aa14□□□□□ -0.17
HDAC6-229ENST00000486665 PRRC2BQ5JSZ5 2229 aaKnown RBP14□□□□□ -0.17
HDAC6-229ENST00000486665 TRIM49BA6NDI0 452 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 EPOPA6NHQ4 379 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ZBBXA8MT70 800 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 CLIC2O15247 247 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 KIF20AO95235 890 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 SFPQP23246 707 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ADSSP30520 456 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ABCD1P33897 745 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 NFX1Q12986 1120 aaKnown RBP13.99□□□□□ -0.17
HDAC6-229ENST00000486665 TCTN1Q2MV58 587 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ATF7IP2Q5U623 682 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ZPBP2Q6X784 338 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 SPRED2Q7Z698 418 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ADAMTS19Q8TE59 1207 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
HDAC6-229ENST00000486665 BICD1Q96G01 975 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 PRIMPOLQ96LW4 560 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 NECAB3Q96P71 396 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-229ENST00000486665 DUSP9Q99956 384 aaKnown RBP13.99□□□□□ -0.17
HDAC6-229ENST00000486665 GBP3Q9H0R5 595 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 PTPRHQ9HD43 1115 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 EXOC7Q9UPT5 735 aa13.99□□□□□ -0.17
HDAC6-229ENST00000486665 CNTNAP2Q9UHC6 1331 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 A0A1B0GUA9 196 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PDXKO00764 312 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 ABLIM1O14639 778 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PSMA7O14818 248 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 GPR182O15218 404 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 MGEA5O60502 916 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 ERLIN2O94905 339 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 CXCL10P02778 98 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PROZP22891 400 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 ERCC5P28715 1186 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PPP1R2P41236 205 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 LIG4P49917 911 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 TFF2Q03403 129 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PAK1Q13153 545 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PAK2Q13177 524 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PCBP1Q15365 356 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PPP2R2DQ66LE6 453 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 TTI2Q6NXR4 508 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 ZBTB33Q86T24 672 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 MICALL1Q8N3F8 863 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 ZSWIM2Q8NEG5 633 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 CBWD1Q9BRT8 395 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 MTIF3Q9H2K0 278 aaKnown RBP13.98□□□□□ -0.17
HDAC6-229ENST00000486665 TSPY26PQ9H489 355 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PCIF1Q9H4Z3 704 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PDZD7Q9H5P4 517 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 CERS4Q9HA82 394 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 AGPAT3Q9NRZ7 376 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 AGPAT5Q9NUQ2 364 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 TYW1Q9NV66 732 aaKnown RBP13.98□□□□□ -0.17
HDAC6-229ENST00000486665 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 RWDD2AQ9UIY3 292 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 TRAF3IP3Q9Y228 551 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 TNFSF13BQ9Y275 285 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 STYXL1Q9Y6J8 313 aa13.98□□□□□ -0.17
HDAC6-229ENST00000486665 COL4A4P53420 1690 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-229ENST00000486665 SIP14410 1827 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 HNRNPDLO14979 420 aaKnown RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 CALUO43852 315 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 TOM1L1O75674 476 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 CA3P07451 260 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 COL9A1P20849 921 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 AXLP30530 894 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 DSC3Q14574 896 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 TMEM132AQ24JP5 1023 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 PLEKHG4Q58EX7 1191 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 CT47A1Q5JQC4 288 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 UBXN11Q5T124 520 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 RTN4RL1Q86UN2 441 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 GAS2L3Q86XJ1 694 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 RPUSD2Q8IZ73 545 aaKnown RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 DBF4BQ8NFT6 615 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 DMAC2Q9NW81 257 aa13.97□□□□□ -0.17
HDAC6-229ENST00000486665 PIN4Q9Y237 131 aaKnown RBP13.97□□□□□ -0.17
HDAC6-229ENST00000486665 A0A0B4J269 797 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 NR3C1P04150 777 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 SNRPFP62306 86 aaKnown RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 MRPS5P82675 430 aaKnown RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 NCBP1Q09161 790 aaKnown RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 IQCB1Q15051 598 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 MPZL3Q6UWV2 235 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 HS2ST1Q7LGA3 356 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 ENOX1Q8TC92 643 aaKnown RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 POMGNT1Q8WZA1 660 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 EEF2KMTQ96G04 330 aa13.96□□□□□ -0.17
HDAC6-229ENST00000486665 UHRF1Q96T88 793 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-229ENST00000486665 TCHPQ9BT92 498 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms