RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RESTQ13127 1097 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 GIT2Q14161 759 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 TMEM119Q4V9L6 283 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 ATF7IP2Q5U623 682 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 DDX53Q86TM3 631 aaKnown RBP14.19□□□□□ -0.14
CHMP3-208ENST00000486404 BCL7CQ8WUZ0 217 aaPredicted RBP14.19□□□□□ -0.14
CHMP3-208ENST00000486404 PNMA5Q96PV4 448 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 POP1Q99575 1024 aaKnown RBP14.19□□□□□ -0.14
CHMP3-208ENST00000486404 ZBP1Q9H171 429 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 KCND2Q9NZV8 630 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 KLK14Q9P0G3 267 aa14.19□□□□□ -0.14
CHMP3-208ENST00000486404 PDCD11Q14690 1871 aaKnown RBP14.18□□□□□ -0.14
CHMP3-208ENST00000486404 C2orf71A6NGG8 1288 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 K7ERI5 159 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 INPPL1O15357 1258 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 MBTPS2O43462 519 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 STX6O43752 255 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 ABCB7O75027 752 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 GLP2RO95838 553 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 ALDH2P05091 517 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 URODP06132 367 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 GUCY2CP25092 1073 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 NPTX2P47972 431 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 AFF1P51825 1210 aaKnown RBP14.18□□□□□ -0.14
CHMP3-208ENST00000486404 SMTNP53814 917 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 STRN3Q13033 797 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 ZNF568Q3ZCX4 644 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 C1orf186Q6ZWK4 172 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 CASP10Q92851 521 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 MRPL4Q9BYD3 311 aaKnown RBP14.18□□□□□ -0.14
CHMP3-208ENST00000486404 C17orf75Q9HAS0 396 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 PRKAG3Q9UGI9 489 aa14.18□□□□□ -0.14
CHMP3-208ENST00000486404 PLXNA3P51805 1871 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 TTLL13PA6NNM8 815 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 NRP1O14786 923 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SLC16A4O15374 487 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 RECQL4O94761 1208 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 CXCL14O95715 111 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 CTSAP10619 480 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 PLCG1P19174 1290 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SLC12A3P55017 1021 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 RBM10P98175 930 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 CEBPZQ03701 1054 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 COASYQ13057 564 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 DHX8Q14562 1220 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SMAD2Q15796 467 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 GPBP1Q86WP2 473 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 FAM178BQ8IXR5 827 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 COLGALT2Q8IYK4 626 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 DAW1Q8N136 415 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 MRPL43Q8N983 215 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SMRP1Q8NCR6 262 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 VN1R2Q8NFZ6 395 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 AUTS2Q8WXX7 1259 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SNX21Q969T3 373 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 MSLNLQ96KJ4 702 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 ZSCAN16Q9H4T2 348 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 SNTG2Q9NY99 539 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 CLEC1BQ9P126 229 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 DAXXQ9UER7 740 aaPredicted RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 USP20Q9Y2K6 914 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 GDAQ9Y2T3 454 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 RBM19Q9Y4C8 960 aaKnown RBP14.17□□□□□ -0.14
CHMP3-208ENST00000486404 CLIC4Q9Y696 253 aa14.17□□□□□ -0.14
CHMP3-208ENST00000486404 H0YCG3 227 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 EDN1P05305 212 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 PLS3P13797 630 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 MARCKSP29966 332 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-208ENST00000486404 YARSP54577 528 aaKnown RBP14.16□□□□□ -0.14
CHMP3-208ENST00000486404 DSC1Q08554 894 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 MAPK7Q13164 816 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 EEF1DP3Q658K8 133 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 GJD3Q8N144 294 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 TCHPQ9BT92 498 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 HERC2P3Q9BVR0 1158 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 COLEC11Q9BWP8 271 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 EMILIN2Q9BXX0 1053 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 MRPL17Q9NRX2 175 aaKnown RBP14.16□□□□□ -0.14
CHMP3-208ENST00000486404 ARHGAP28Q9P2N2 729 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 ANKFY1Q9P2R3 1169 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 CCDC39Q9UFE4 941 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 MTMR6Q9Y217 621 aa14.16□□□□□ -0.14
CHMP3-208ENST00000486404 USP15Q9Y4E8 981 aaPredicted RBP14.16□□□□□ -0.14
CHMP3-208ENST00000486404 SFI1A8K8P3 1242 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 C2CD2LO14523 706 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 CLASP2O75122 1294 aaKnown RBP14.15□□□□□ -0.14
CHMP3-208ENST00000486404 FAM13AO94988 1023 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
CHMP3-208ENST00000486404 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHMP3-208ENST00000486404 GLUD2P49448 558 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 GRIN1Q05586 938 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 ZP2Q05996 745 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 TUSC3Q13454 348 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 PTPN14Q15678 1187 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms