RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 UBXN11Q5T124 520 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 ANO5Q75V66 913 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 SRGAP1Q7Z6B7 1085 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 SUMF1Q8NBK3 374 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 PRPF31Q8WWY3 499 aaKnown RBP17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 SLC7A3Q8WY07 619 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 B3GALT6Q96L58 329 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 PRKD2Q9BZL6 878 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 MINDY3Q9H8M7 445 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 SLC2A4RGQ9NR83 387 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 PCDHA4Q9UN74 947 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 TPRP12270 2363 aaKnown RBP17.22■□□□□ 0.35
PLXNB3-208ENST00000485980 MTCL1Q9Y4B5 1905 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 F8W810 466 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 LAMTOR5O43504 91 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 HOXA11P31270 313 aaPredicted RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 NPEPPSP55786 919 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 STARD6P59095 220 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 PSMC5P62195 406 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 GPC5P78333 572 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 HMGN5P82970 282 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 VARS2Q5ST30 1063 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 MAML2Q8IZL2 1156 aaPredicted RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 BLIDQ8IZY5 108 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 CNNM3Q8NE01 707 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 TMEM143Q96AN5 459 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 GAD1Q99259 594 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 RPP25Q9BUL9 199 aaKnown RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 COLEC11Q9BWP8 271 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 APOL6Q9BWW8 343 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 BCO2Q9BYV7 579 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 ZDHHC7Q9NXF8 308 aa17.21■□□□□ 0.35
PLXNB3-208ENST00000485980 ARL5CA6NH57 179 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 JAK2O60674 1132 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 ERLIN2O94905 339 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 TDP2O95551 362 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 RPL17P18621 184 aaKnown RBP17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 FSHRP23945 695 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 MLH1P40692 756 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 SCNN1GP51170 649 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 FOSBP53539 338 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 CSTF1Q05048 431 aaKnown RBP17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 UBXN2BQ14CS0 331 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 Q4G0T1 1027 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 RNF168Q8IYW5 571 aaPredicted RBP17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 ATRIPQ8WXE1 791 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 PSPC1Q8WXF1 523 aaKnown RBP17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 CEP170P1Q96L14 293 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 MIOSQ9NXC5 875 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 IPPQ9Y573 584 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 EPG5Q9HCE0 2579 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 SPTBN2O15020 2390 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 GPR179Q6PRD1 2367 aa17.2■□□□□ 0.34
PLXNB3-208ENST00000485980 MIA3Q5JRA6 1907 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 KANSL1LA0AUZ9 987 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 LAMTOR4Q0VGL1 99 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 SAFBQ15424 915 aaKnown RBP eCLIP17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 USP41Q3LFD5 358 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 PARM1Q6UWI2 310 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 KRT25Q7Z3Z0 450 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 GRASPQ7Z6J2 395 aaPredicted RBP17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 FGF14Q92915 247 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 ZFP42Q96MM3 310 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 EIF2AQ9BY44 585 aaKnown RBP17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 CHST7Q9NS84 486 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 KCNJ14Q9UNX9 436 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 HES2Q9Y543 173 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 DOCK6Q96HP0 2047 aa17.19■□□□□ 0.34
PLXNB3-208ENST00000485980 FAM170BA6NMN3 283 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 DTNBO60941 627 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 ZMYND10O75800 440 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 EFEMP2O95967 443 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 SDHBP21912 280 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 KRT2P35908 639 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 DSC1Q08554 894 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 NCBP1Q09161 790 aaKnown RBP17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 ZNF528Q3MIS6 628 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 FUT10Q6P4F1 479 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 B3GNT9Q6UX72 402 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 RNF149Q8NC42 400 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 RABGGTAQ92696 567 aa17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 SECISBP2LQ93073 1101 aaKnown RBP17.18■□□□□ 0.34
PLXNB3-208ENST00000485980 PHF20Q9BVI0 1012 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms