RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	ALDH5A1	P51649	535 aa	Predicted RBP	5.11	□□□□□ -1.59
FN1-222	ENST00000485567	NKX6-1	P78426	367 aa	Predicted RBP	5.11	□□□□□ -1.59
FN1-222	ENST00000485567	NOG	Q13253	232 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	PCOLCE	Q15113	449 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	CNN3	Q15417	329 aa	Known RBP	5.11	□□□□□ -1.59
FN1-222	ENST00000485567	MORC1	Q86VD1	984 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	ZNF480	Q8WV37	535 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	LRTOMT	Q8WZ04	291 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	CLPTM1L	Q96KA5	538 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	TNIP3	Q96KP6	325 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	SAMD11	Q96NU1	681 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	MYD88	Q99836	296 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	CARD11	Q9BXL7	1154 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	NUP62CL	Q9H1M0	184 aa		5.11	□□□□□ -1.59
FN1-222	ENST00000485567	C14orf93	Q9H972	538 aa	Known RBP	5.11	□□□□□ -1.59
FN1-222	ENST00000485567	SH3D21	A4FU49	640 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	C2orf78	A6NCI8	922 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	IFRD1	O00458	451 aa	Predicted RBP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	DDX3X	O00571	662 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	MGEA5	O60502	916 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	PQBP1	O60828	265 aa	Known RBP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	MED14OS	P0DP75	135 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	RPL17	P18621	184 aa	Known RBP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	SREBF1	P36956	1147 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	TM4SF4	P48230	202 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	DLX2	Q07687	328 aa	Predicted RBP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	TARDBP	Q13148	414 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	SAFB2	Q14151	953 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	FGL2	Q14314	439 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	CCDC157	Q569K6	752 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	CNKSR3	Q6P9H4	555 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	PQLC1	Q8N2U9	271 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	MSL3	Q8N5Y2	521 aa	Known RBP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.1	□□□□□ -1.59
FN1-222	ENST00000485567	TMEM168	Q9H0V1	697 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	NLRC4	Q9NPP4	1024 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	GPRC5D	Q9NZD1	345 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	TRPS1	Q9UHF7	1281 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	TAGLN3	Q9UI15	199 aa		5.1	□□□□□ -1.59
FN1-222	ENST00000485567	ETV2	O00321	342 aa	Predicted RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	FTH1P19	P0C7X4	201 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	GYPE	P15421	78 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	PEX2	P28328	305 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	MRE11	P49959	708 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	PER3	P56645	1201 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	RAB1A	P62820	205 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	ATP8B2	P98198	1209 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	TLE1	Q04724	770 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	ADAM15	Q13444	863 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	USP10	Q14694	798 aa	Known RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	POLD3	Q15054	466 aa	Predicted RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	KHDC1	Q4VXA5	237 aa	Known RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	SWSAP1	Q6NVH7	229 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	HEATR3	Q7Z4Q2	680 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	DPP9	Q86TI2	863 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	RSPH3	Q86UC2	560 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	FAM186B	Q8IYM0	893 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	KLHL36	Q8N4N3	616 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	PLBD2	Q8NHP8	589 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	IFI44	Q8TCB0	444 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	CASKIN2	Q8WXE0	1202 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	GCDH	Q92947	438 aa	Predicted RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	MTFMT	Q96DP5	389 aa	Known RBP	5.09	□□□□□ -1.59
FN1-222	ENST00000485567	IL17RA	Q96F46	866 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	ARPC5L	Q9BPX5	153 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	BTBD1	Q9H0C5	482 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	OR10A2	Q9H208	303 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	JADE2	Q9NQC1	790 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	TLR9	Q9NR96	1032 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	LANCL2	Q9NS86	450 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	LMBRD1	Q9NUN5	540 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	PNPO	Q9NVS9	261 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	NTM	Q9P121	344 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	ADAM29	Q9UKF5	820 aa		5.09	□□□□□ -1.59
FN1-222	ENST00000485567	MYBBP1A	Q9BQG0	1328 aa	Known RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	CFAP69	A5D8W1	941 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	C9orf118	A6NHY6	69 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	FOXN3	O00409	490 aa	Predicted RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	PHGDH	O43175	533 aa	Known RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	AMY1A	P04745	511 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	JUN	P05412	331 aa	Known RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	VSIG10L2	P0DP72	767 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	MYF5	P13349	255 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	TYR	P14679	529 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	ZKSCAN1	P17029	563 aa	Predicted RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	MAL	P21145	153 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	SERPINB3	P29508	390 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	CSF2RB	P32927	897 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	GUCY1A2	P33402	732 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	SARS	P49591	514 aa	Known RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	IFIT5	Q13325	482 aa	Known RBP	5.08	□□□□□ -1.6
FN1-222	ENST00000485567	GAGE13	Q4V321	117 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	VWA3B	Q502W6	1294 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	ZMAT1	Q5H9K5	638 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	FAM26F	Q5R3K3	315 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	AGBL4	Q5VU57	503 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	TSHZ1	Q6ZSZ6	1077 aa		5.08	□□□□□ -1.6
FN1-222	ENST00000485567	ANKS1A	Q92625	1134 aa		5.08	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms