RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 LSM14BQ9BX40 385 aaKnown RBP7.12□□□□□ -1.27
ATP13A3-207ENST00000484023 PHF2O75151 1096 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 C1QL3Q5VWW1 255 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 ANKS6Q68DC2 871 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 PNMA8AQ86V59 439 aaPredicted RBP7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 EXTL1Q92935 676 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 MIEF2Q96C03 454 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 PGBD4Q96DM1 585 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 TEKT5Q96M29 485 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 DDX56Q9NY93 547 aaKnown RBP7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 TESMINQ9Y4I5 508 aa7.11□□□□□ -1.27
ATP13A3-207ENST00000484023 INSRRP14616 1297 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 GNAT2P19087 354 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 NCLP19338 710 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 HK1P19367 917 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 ECHS1P30084 290 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 CRHR1P34998 444 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 PTPN7P35236 360 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 SREBF1P36956 1147 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 SLC6A9P48067 706 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 SCNN1GP51170 649 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 RABGGTBP53611 331 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 EXOSC10Q01780 885 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 USP39Q53GS9 565 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 MFSD14BQ5SR56 506 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 MFSD5Q6N075 450 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 TRMT2AQ8IZ69 625 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 ANKRD35Q8N283 1001 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 OR7D4Q8NG98 312 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 ATXN2LQ8WWM7 1075 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 ST8SIA2Q92186 375 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 BORCS6Q96GS4 357 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 CPPED1Q9BRF8 314 aaPredicted RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 CPEB1Q9BZB8 566 aaKnown RBP7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 LDAHQ9H6V9 325 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 SIK3Q9Y2K2 1263 aa7.1□□□□□ -1.27
ATP13A3-207ENST00000484023 MFAP3LO75121 409 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 ACRV1P26436 265 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 MGAT2Q10469 447 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 RRP1BQ14684 758 aaKnown RBP7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 CSRP2Q16527 193 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 APBB1IPQ7Z5R6 666 aaPredicted RBP7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 MDGA1Q8NFP4 955 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 STON2Q8WXE9 905 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 SSH1Q8WYL5 1049 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 BCO1Q9HAY6 547 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 INTUQ9ULD6 942 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 GIT1Q9Y2X7 761 aa7.09□□□□□ -1.27
ATP13A3-207ENST00000484023 KLRG2A4D1S0 409 aaPredicted RBP7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 C1QTNF3-AMACRE9PGA6 284 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 GASTP01350 101 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 PTTG1IPP53801 180 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 PER3P56645 1201 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 KRT85P78386 507 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 CRHR2Q13324 411 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 GGNQ86UU5 652 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 GSPT2Q8IYD1 628 aaKnown RBP7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 THEMISQ8N1K5 641 aaPredicted RBP7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 PQLC1Q8N2U9 271 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 IL17DQ8TAD2 202 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 UHRF1Q96T88 793 aaPredicted RBP7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 PDCD2LQ9BRP1 358 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 SLC13A1Q9BZW2 595 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 SERPINB13Q9UIV8 391 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 MRFAP1Q9Y605 127 aa7.08□□□□□ -1.28
ATP13A3-207ENST00000484023 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 PDGFRBP09619 1106 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 CCND1P24385 295 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 FAM180AQ6UWF9 173 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 C1orf210Q8IVY1 113 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 SLC35B2Q8TB61 432 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 RAB24Q969Q5 203 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 MNTQ99583 582 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 GPR87Q9BY21 358 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 KCNH6Q9H252 994 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 LIMCH1Q9UPQ0 1083 aa7.07□□□□□ -1.28
ATP13A3-207ENST00000484023 CYP27B1O15528 508 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 IPO13O94829 963 aaKnown RBP7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 ZRANB2O95218 330 aaKnown RBP eCLIP7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 FPR1P21462 350 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 MAN2A2P49641 1150 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 KIF23Q02241 960 aaPredicted RBP7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 PUM1Q14671 1186 aaKnown RBP eCLIP7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 EFCAB2Q5VUJ9 269 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 PDZD4Q76G19 769 aaPredicted RBP7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 DOK3Q7L591 496 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 FAM83AQ86UY5 434 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 OR52N2Q8NGI0 321 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 CCHCR1Q8TD31 782 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 AJAP1Q9UKB5 411 aaPredicted RBP7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 HDAC5Q9UQL6 1122 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 ATRNL1Q5VV63 1379 aa7.06□□□□□ -1.28
ATP13A3-207ENST00000484023 XDHP47989 1333 aa7.05□□□□□ -1.28
ATP13A3-207ENST00000484023 C1SP09871 688 aa7.05□□□□□ -1.28
ATP13A3-207ENST00000484023 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
ATP13A3-207ENST00000484023 EDNRBP24530 442 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms