RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PRSS55Q6UWB4 352 aaPredicted RBP12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 DHX32Q7L7V1 743 aaKnown RBP12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 GPR161Q8N6U8 529 aaKnown RBP12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 RDM1Q8NG50 284 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 CCDC12Q8WUD4 166 aaPredicted RBP12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 FGF13Q92913 245 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 TMEM143Q96AN5 459 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 KXD1Q9BQD3 176 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 LTB4R2Q9NPC1 389 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 BMP2KQ9NSY1 1161 aaPredicted RBP12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 ZSCAN32Q9NX65 697 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 CACNG4Q9UBN1 327 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 CDH7Q9ULB5 785 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 USP18Q9UMW8 372 aa12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 ZFP37Q9Y6Q3 630 aaPredicted RBP12.17□□□□□ -0.46
SMARCC1-205ENST00000483847 C1RP00736 705 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 ADRB1P08588 477 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 TARSP26639 723 aaKnown RBP12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 USP11P51784 963 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 PRKCQQ04759 706 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 LAMTOR4Q0VGL1 99 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 RTP2Q5QGT7 225 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 ITFG1Q8TB96 612 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 MBOAT7Q96N66 472 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 RTKNQ9BST9 563 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 APOL6Q9BWW8 343 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 OSBPL6Q9BZF3 934 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 FNIP2Q9P278 1114 aa12.16□□□□□ -0.46
SMARCC1-205ENST00000483847 SHISA7A6NL88 538 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 EML1O00423 815 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 PRPF3O43395 683 aaKnown RBP12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 TSPAN1O60635 241 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 CPA1P15085 419 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 RCAN1P53805 252 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 FZD5Q13467 585 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 Q4G0T1 1027 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 GSTCDQ8NEC7 633 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 BICD2Q8TD16 824 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 TBCKQ8TEA7 893 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 CLDN23Q96B33 292 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 BORCS6Q96GS4 357 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 CPB2Q96IY4 423 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 PAAF1Q9BRP4 392 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 UBN1Q9NPG3 1134 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 WRAP73Q9P2S5 460 aaPredicted RBP12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 FBXW11Q9UKB1 542 aa12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 RALYQ9UKM9 306 aaKnown RBP12.15□□□□□ -0.46
SMARCC1-205ENST00000483847 NOTCH4Q99466 2003 aa12.15□□□□□ -0.47
SMARCC1-205ENST00000483847 CEP295Q9C0D2 2601 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 BAHCC1Q9P281 2608 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 CCL16O15467 120 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 PSMC5P62195 406 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 SPEM2Q0P670 501 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 LPAL2Q16609 132 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 ZBTB41Q5SVQ8 909 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 TPRG1Q6ZUI0 275 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 MTSS1LQ765P7 747 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 RNF149Q8NC42 400 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 ETNPPLQ8TBG4 499 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 SLC7A3Q8WY07 619 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 CLSTN3Q9BQT9 956 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 NXF3Q9H4D5 531 aaKnown RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 DHX33Q9H6R0 707 aaKnown RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 HCFC1R1Q9NWW0 138 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 ADAM28Q9UKQ2 775 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 POLIQ9UNA4 740 aa12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.14□□□□□ -0.47
SMARCC1-205ENST00000483847 FRYQ5TBA9 3013 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 CYP3A7-CYP3A51PA0A087WV96 503 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 ADAM12O43184 909 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 TBC1D4O60343 1298 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 NR1I2O75469 434 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 ERLIN2O94905 339 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 C8AP07357 584 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 CYP3A7P24462 503 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 AKAP5P24588 427 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 MAGEA9P43362 315 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 MTAPQ13126 283 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 NTRK3Q16288 839 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 POTEHQ6S545 545 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 RSPO2Q6UXX9 243 aaPredicted RBP12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 CDR2LQ86X02 465 aaPredicted RBP12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 GPR65Q8IYL9 337 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms