RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TRAIPQ9BWF2 469 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 GBP3Q9H0R5 595 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 TTC3P53804 2025 aa19.51■□□□□ 0.71
CPNE1-224ENST00000483359 PRCPP42785 496 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 RABGGTBP53611 331 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 MORC3Q14149 939 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 KNOP1Q1ED39 458 aaKnown RBP19.5■□□□□ 0.71
CPNE1-224ENST00000483359 DCAF4L1Q3SXM0 396 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 NOC3LQ8WTT2 800 aaKnown RBP19.5■□□□□ 0.71
CPNE1-224ENST00000483359 POMGNT1Q8WZA1 660 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 CBWD1Q9BRT8 395 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 ZBED2Q9BTP6 218 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 TMEM161AQ9NX61 479 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 SNTG2Q9NY99 539 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 ADSSP30520 456 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 NPAS4Q8IUM7 802 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 HERC6Q8IVU3 1022 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 TMEM192Q8IY95 271 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 MSTO1Q9BUK6 570 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 PCIF1Q9H4Z3 704 aa19.5■□□□□ 0.71
CPNE1-224ENST00000483359 CLIC2O15247 247 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 TGFB1I1O43294 461 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 STAG3L1P0CL83 205 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 FAM189BP81408 668 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 MCL1Q07820 350 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 ZBTB41Q5SVQ8 909 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 KLHL10Q6JEL2 608 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 ARMCX5Q6P1M9 558 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 ZNF598Q86UK7 904 aaKnown RBP19.49■□□□□ 0.71
CPNE1-224ENST00000483359 SAAL1Q96ER3 474 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 RNF19AQ9NV58 838 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 PARP2Q9UGN5 583 aa19.49■□□□□ 0.71
CPNE1-224ENST00000483359 TULP1O00294 542 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 GJB5O95377 273 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 MCF2P10911 925 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 SKIP12755 728 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 ITGA4P13612 1032 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 CD44P16070 742 aaKnown RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 PAN2Q504Q3 1202 aaKnown RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 APBB1IPQ7Z5R6 666 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 CRIPAKQ8N1N5 446 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 GUF1Q8N442 669 aaKnown RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 ZSWIM2Q8NEG5 633 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 HELQQ8TDG4 1101 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 AGPAT3Q9NRZ7 376 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 KLK14Q9P0G3 267 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 INPP5FQ9Y2H2 1132 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 A0A0B4J269 797 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 ZNF623O75123 536 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 KIF20AO95235 890 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 TNFSF9P41273 254 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 AGMOQ6ZNB7 445 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 HS2ST1Q7LGA3 356 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 SYAP1Q96A49 352 aaPredicted RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 YME1L1Q96TA2 773 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
CPNE1-224ENST00000483359 ELAC1Q9H777 363 aaKnown RBP19.48■□□□□ 0.71
CPNE1-224ENST00000483359 GBF1Q92538 1859 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 TLL1O43897 1013 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 RECQL4O94761 1208 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 EOMESO95936 686 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 MYOGP15173 224 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 MLH1P40692 756 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 ACOT2P49753 483 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 CLLU1OSQ5K130 101 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 SLFN12LQ6IEE8 588 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 FAM43BQ6ZT52 329 aaPredicted RBP19.47■□□□□ 0.71
CPNE1-224ENST00000483359 HACE1Q8IYU2 909 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 TRIML1Q8N9V2 468 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 PHOSPHO2Q8TCD6 241 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 PGBD4Q96DM1 585 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 ZFP42Q96MM3 310 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 RSAD1Q9HA92 442 aa19.47■□□□□ 0.71
CPNE1-224ENST00000483359 AGO2Q9UKV8 859 aaKnown RBP19.47■□□□□ 0.71
CPNE1-224ENST00000483359 GOLGA8IPA6NC78 632 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 GOLGA8JA6NMD2 632 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 CYP2J2P51589 502 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 AFF1P51825 1210 aaKnown RBP19.46■□□□□ 0.71
CPNE1-224ENST00000483359 RBM43Q6ZSC3 357 aaKnown RBP19.46■□□□□ 0.71
CPNE1-224ENST00000483359 MRPL10Q7Z7H8 261 aaKnown RBP19.46■□□□□ 0.71
CPNE1-224ENST00000483359 ABI1Q8IZP0 508 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 ADSSL1Q8N142 457 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 TYW1Q9NV66 732 aaKnown RBP19.46■□□□□ 0.71
CPNE1-224ENST00000483359 STYXL1Q9Y6J8 313 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 TBKBP1A7MCY6 615 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 DGKIO75912 1065 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 PBX2P40425 430 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 GRM5P41594 1212 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 STIM1Q13586 685 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 DPCR1Q3MIW9 517 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 GAD1Q99259 594 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 FAM213AQ9BRX8 229 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
CPNE1-224ENST00000483359 CXCL16Q9H2A7 254 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 SEMA6BQ9H3T3 888 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 CTNND2Q9UQB3 1225 aa19.46■□□□□ 0.71
CPNE1-224ENST00000483359 COL4A6Q14031 1691 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 TRIM49BA6NDI0 452 aa19.45■□□□□ 0.7
CPNE1-224ENST00000483359 OGTO15294 1046 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms