RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PCDHB6Q9Y5E3 794 aa8.34□□□□□ -1.07
COL4A5-205ENST00000483338 A0A088AWK7 358 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.34□□□□□ -1.08
COL4A5-205ENST00000483338 KCNK3O14649 394 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 EXOC3O60645 756 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 LMNB1P20700 586 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 STT3AP46977 705 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 MKRN3Q13064 507 aaKnown RBP8.34□□□□□ -1.08
COL4A5-205ENST00000483338 HNRNPDQ14103 355 aaKnown RBP8.34□□□□□ -1.08
COL4A5-205ENST00000483338 CRY1Q16526 586 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 IL23RQ5VWK5 629 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 DDHD1Q8NEL9 900 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 PPP4R1Q8TF05 950 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 ERP44Q9BS26 406 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 NT5C3AQ9H0P0 336 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 NLRC4Q9NPP4 1024 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 AXIN2Q9Y2T1 843 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 SNX9Q9Y5X1 595 aa8.34□□□□□ -1.08
COL4A5-205ENST00000483338 TNS3Q68CZ2 1445 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 FOXO6A8MYZ6 492 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 MAPK13O15264 365 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TATP17735 454 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 GNA11P29992 359 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 RPL5P46777 297 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 SPOPLQ6IQ16 392 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 NOSTRINQ8IVI9 506 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 MYO1HQ8N1T3 1032 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 SPERTQ8NA61 448 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 GOLM1Q8NBJ4 401 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 U2AF1L4Q8WU68 220 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 USP6NLQ92738 828 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PHKBQ93100 1093 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PRPF18Q99633 342 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TRIM51Q9BSJ1 452 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 CCSER1Q9C0I3 900 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TRNAU1APQ9NX07 287 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 STXBP5LQ9Y2K9 1186 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ATP6V0A2Q9Y487 856 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ZNF536O15090 1300 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 A0A1W2PQJ5 194 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 EPHB6O15197 1021 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 MTRF1O75570 445 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 AMPD1P23109 780 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TCEA1P23193 301 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 EEF1GP26641 437 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ENTPD1P49961 510 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 WASHC5Q12768 1159 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 THOC5Q13769 683 aaKnown RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 C16orf72Q14CZ0 275 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 CNGA3Q16281 694 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 CATIPQ7Z7H3 387 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 VPS36Q86VN1 386 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PASD1Q8IV76 773 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 REM2Q8IYK8 340 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ERLEC1Q96DZ1 483 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PCMTD1Q96MG8 357 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PITPNM3Q9BZ71 974 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ZDHHC18Q9NUE0 388 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 CLEC11AQ9Y240 323 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 GDAQ9Y2T3 454 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 XDHP47989 1333 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PNPLA7Q6ZV29 1317 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 NWD1Q149M9 1564 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 CFAP69A5D8W1 941 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 NBPF26B4DH59 902 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 GSC2O15499 205 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ANPEPP15144 967 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TAC1P20366 129 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 SLC16A2P36021 539 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 HSD17B4P51659 736 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TUBA1BP68363 451 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 MED21Q13503 144 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TAF1BQ53T94 588 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 TUBA1AQ71U36 451 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 ANKMY2Q8IV38 441 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PYROXD1Q8WU10 500 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 EEF2KMTQ96G04 330 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 C2orf49Q9BVC5 232 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 SENP6Q9GZR1 1112 aaPredicted RBP8.33□□□□□ -1.08
COL4A5-205ENST00000483338 SEMA4AQ9H3S1 761 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 PLGRKTQ9HBL7 147 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 KIAA1257Q9ULG3 409 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 DMTF1Q9Y222 760 aa8.33□□□□□ -1.08
COL4A5-205ENST00000483338 RPTORQ8N122 1335 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 BTBD18B2RXH4 712 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 CHRNB1P11230 501 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 FOXN2P32314 431 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 MXI1P50539 228 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ASTE1Q2TB18 679 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ZNF530Q6P9A1 599 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 RFX8Q6ZV50 586 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PHLDB2Q86SQ0 1253 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 APPBP2Q92624 585 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 GRAMD1AQ96CP6 724 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 CEP72Q9P209 647 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ANGPTL2Q9UKU9 493 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms