RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 GIT1Q9Y2X7 761 aa12.76□□□□□ -0.37
EPHB3-203ENST00000482987 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
EPHB3-203ENST00000482987 NPTXRO95502 500 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 MYBP10242 640 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 XRCC6P12956 609 aaKnown RBP eCLIP12.75□□□□□ -0.37
EPHB3-203ENST00000482987 GLUD2P49448 558 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 DSG1Q02413 1049 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 NCBP1Q09161 790 aaKnown RBP12.75□□□□□ -0.37
EPHB3-203ENST00000482987 TRIM29Q14134 588 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 CDCA2Q69YH5 1023 aaPredicted RBP12.75□□□□□ -0.37
EPHB3-203ENST00000482987 SLC27A1Q6PCB7 646 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 CCDC149Q6ZUS6 474 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 KMT2EQ8IZD2 1858 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 TMEM105Q8N8V8 129 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 BSNDQ8WZ55 320 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 TRIM6Q9C030 488 aaPredicted RBP12.75□□□□□ -0.37
EPHB3-203ENST00000482987 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 FAM86C1Q9NVL1 165 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 KLK14Q9P0G3 267 aa12.75□□□□□ -0.37
EPHB3-203ENST00000482987 ARID2Q68CP9 1835 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 LRRIQ4A6NIV6 560 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 RFPL2O75678 378 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 EDN1P05305 212 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 ADH1AP07327 375 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 CMASQ8NFW8 434 aaPredicted RBP12.74□□□□□ -0.37
EPHB3-203ENST00000482987 CCDC43Q96MW1 224 aaKnown RBP12.74□□□□□ -0.37
EPHB3-203ENST00000482987 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 CXCL16Q9H2A7 254 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 FZD8Q9H461 694 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 USP20Q9Y2K6 914 aa12.74□□□□□ -0.37
EPHB3-203ENST00000482987 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 H0Y858 1186 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 PAPLNO95428 1278 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 GLUD1P00367 558 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 SPATA31D3P0C874 917 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 GRIK3Q13003 919 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 ZNF174Q15697 407 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 ECM1Q16610 540 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 FAM187BQ17R55 369 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 FUT10Q6P4F1 479 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 SPATA31D4Q6ZUB0 917 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 OTOP3Q7RTS5 596 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 ZNF707Q96C28 371 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-203ENST00000482987 ACSF2Q96CM8 615 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-203ENST00000482987 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
EPHB3-203ENST00000482987 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 PDZD7Q9H5P4 517 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 KCNK12Q9HB15 430 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 PARP2Q9UGN5 583 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 ADAM28Q9UKQ2 775 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 SSX2IPQ9Y2D8 614 aa12.73□□□□□ -0.37
EPHB3-203ENST00000482987 ZMYM2Q9UBW7 1377 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 PTGESO14684 152 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 TGM5O43548 720 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
EPHB3-203ENST00000482987 OR52Z1P0C646 297 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 RPL17P18621 184 aaKnown RBP12.72□□□□□ -0.37
EPHB3-203ENST00000482987 RPA1P27694 616 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 CWF19L1Q69YN2 538 aaKnown RBP12.72□□□□□ -0.37
EPHB3-203ENST00000482987 LILRA6Q6PI73 481 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 PALB2Q86YC2 1186 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 GLYCTKQ8IVS8 523 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 RHOBTB2Q9BYZ6 727 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 CCDC113Q9H0I3 377 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
EPHB3-203ENST00000482987 PRMT7Q9NVM4 692 aaPredicted RBP12.72□□□□□ -0.37
EPHB3-203ENST00000482987 LIMCH1Q9UPQ0 1083 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 DENND4AQ7Z401 1863 aa12.72□□□□□ -0.37
EPHB3-203ENST00000482987 CLUHO75153 1309 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 CASTOR2A6NHX0 329 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 NARSO43776 548 aaKnown RBP12.71□□□□□ -0.37
EPHB3-203ENST00000482987 NR1I2O75469 434 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 KIF4AO95239 1232 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 NPR3P17342 541 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 CYP11B2P19099 503 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 NUBP1P53384 320 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 TDGQ13569 410 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 HSP90AA2PQ14568 343 aaPredicted RBP12.71□□□□□ -0.37
EPHB3-203ENST00000482987 NBR1Q14596 966 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 SAFBQ15424 915 aaKnown RBP eCLIP12.71□□□□□ -0.37
EPHB3-203ENST00000482987 NAB2Q15742 525 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 USP41Q3LFD5 358 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 RTP2Q5QGT7 225 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 EEF1DP3Q658K8 133 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
EPHB3-203ENST00000482987 PADI6Q6TGC4 694 aa12.71□□□□□ -0.37
EPHB3-203ENST00000482987 PRSS55Q6UWB4 352 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms