RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 PDE6AP16499 860 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 CCNE1P24864 410 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 CXADRP78310 365 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 FAM189BP81408 668 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 GRM2Q14416 872 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 TRIP6Q15654 476 aaKnown RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 ELF2Q15723 593 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 UTP14CQ5TAP6 766 aaKnown RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 CRYBG3Q68DQ2 2970 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 PKN3Q6P5Z2 889 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 GRASPQ7Z6J2 395 aaPredicted RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 IGSF21Q96ID5 467 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 ZNF512BQ96KM6 892 aaPredicted RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 FSCN3Q9NQT6 498 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 C1orf112Q9NSG2 853 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 MTMR7Q9Y216 660 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 NOC2LQ9Y3T9 749 aaKnown RBP7.56□□□□□ -1.2
CHD6-209ENST00000482596 PIAS3Q9Y6X2 628 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 ADGRG4Q8IZF6 3080 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 SPG11Q96JI7 2443 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 PDZD2O15018 2839 aa7.56□□□□□ -1.2
CHD6-209ENST00000482596 CCDC171Q6TFL3 1326 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 ZNF532Q9HCE3 1301 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 MBLAC1A4D2B0 266 aaPredicted RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 ZC3H11AO75152 810 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHD6-209ENST00000482596 PRDM1O75626 825 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 EIF3JO75822 258 aaKnown RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 AKAP3O75969 853 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 ENGP17813 658 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 VARSP26640 1264 aaKnown RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 LRRC69Q6ZNQ3 347 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 TOGARAM2Q6ZUX3 1019 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 TMC8Q8IU68 726 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 WWC1Q8IX03 1113 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 ARMC2Q8NEN0 867 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 HELQQ8TDG4 1101 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 DNASE1L2Q92874 299 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 CELF4Q9BZC1 486 aaKnown RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 ELAC1Q9H777 363 aaKnown RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 MLXIPQ9HAP2 919 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 POLMQ9NP87 494 aaPredicted RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 ATP8A2Q9NTI2 1148 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 MAN2B2Q9Y2E5 1009 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 BSNQ9UPA5 3926 aa7.55□□□□□ -1.2
CHD6-209ENST00000482596 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
CHD6-209ENST00000482596 GON4LQ3T8J9 2241 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 B4E1Z4 1266 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 TEX28O15482 410 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 RHOBTB1O94844 696 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 MBD4O95243 580 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 GLUD1P00367 558 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 CD59P13987 128 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 ELAVL4P26378 380 aaKnown RBP7.54□□□□□ -1.2
CHD6-209ENST00000482596 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
CHD6-209ENST00000482596 IGBP1P78318 339 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 PPFIA1Q13136 1202 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 AGERQ15109 404 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 GRIK4Q16099 956 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 TNNI3KQ59H18 835 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 TRIM61Q5EBN2 209 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 SLC9C2Q5TAH2 1124 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 IER5Q5VY09 327 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 TANGO2Q6ICL3 276 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 PDXDC2PQ6P474 469 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 TMPRSS7Q7RTY8 843 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 ZNF280BQ86YH2 543 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 ABI1Q8IZP0 508 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 RNF169Q8NCN4 708 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 OR2I1PQ8NGU4 316 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
CHD6-209ENST00000482596 NSUN6Q8TEA1 469 aaKnown RBP7.54□□□□□ -1.2
CHD6-209ENST00000482596 ING5Q8WYH8 240 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 HPS1Q92902 700 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 WBP1Q96G27 269 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 RMDN3Q96TC7 470 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 SYNPO2Q9UMS6 1093 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 ST3GAL5Q9UNP4 418 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 INVSQ9Y283 1065 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 FPGT-TNNI3KV9GXZ4 949 aa7.54□□□□□ -1.2
CHD6-209ENST00000482596 FRMPD4Q14CM0 1322 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 ZBED9Q6R2W3 1325 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 VWA8A3KMH1 1905 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 CCDC163A0A0D9SF12 145 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 FAM149AA5PLN7 773 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 NOP56O00567 594 aaKnown RBP7.53□□□□□ -1.2
CHD6-209ENST00000482596 SH3BP5O60239 455 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 B4GALT3O60512 393 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 ECI2O75521 394 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 NR3C2P08235 984 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 AK2P54819 239 aa7.53□□□□□ -1.2
CHD6-209ENST00000482596 NFKB2Q00653 900 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms