RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RGPD3A6NKT7 1758 aaPredicted RBP8.55□□□□□ -1.04
SNX13-208ENST00000482558 RGPD4Q7Z3J3 1758 aa8.55□□□□□ -1.04
SNX13-208ENST00000482558 SNED1Q8TER0 1413 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 CDK5RAP2Q96SN8 1893 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 A0A087X0B3 334 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 hCG_1642624A0A1W2PR95 340 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 BICDL2A1A5D9 508 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 H0YIN7 160 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 SMIM22K7EJ46 135 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 TIMM44O43615 452 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 GREM1O60565 184 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 F13BP05160 661 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 CELA3AP09093 270 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 OR52Z1P0C646 297 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 GCFC2P16383 781 aaKnown RBP8.54□□□□□ -1.04
SNX13-208ENST00000482558 BMP6P22004 513 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 MRPL12P52815 198 aaKnown RBP8.54□□□□□ -1.04
SNX13-208ENST00000482558 TUBB4BP68371 445 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 FAAP100Q0VG06 881 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 PAK1Q13153 545 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 TBX2Q13207 712 aaPredicted RBP8.54□□□□□ -1.04
SNX13-208ENST00000482558 CUL4BQ13620 913 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 SEPT6Q14141 434 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 IKBKEQ14164 716 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 PDIA5Q14554 519 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 COBLL1Q53SF7 1204 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 EARS2Q5JPH6 523 aaKnown RBP8.54□□□□□ -1.04
SNX13-208ENST00000482558 CDKAL1Q5VV42 579 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 NXNQ6DKJ4 435 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 ARMCX5Q6P1M9 558 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 FOXR2Q6PJQ5 311 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 PPFIBP1Q86W92 1011 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 CNGA4Q8IV77 575 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 FAM114A1Q8IWE2 563 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 TCEAL8Q8IYN2 117 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 OR6P1Q8NGX9 317 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 RASSF8Q8NHQ8 419 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 CEP95Q96GE4 821 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 CALML4Q96GE6 196 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 DHTKD1Q96HY7 919 aaPredicted RBP8.54□□□□□ -1.04
SNX13-208ENST00000482558 C16orf45Q96MC5 204 aaPredicted RBP8.54□□□□□ -1.04
SNX13-208ENST00000482558 CDH19Q9H159 772 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 USP40Q9NVE5 1235 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 TAGLN3Q9UI15 199 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 PHLPP2Q6ZVD8 1323 aa8.54□□□□□ -1.04
SNX13-208ENST00000482558 COL2A1P02458 1487 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 AKR1B15C9JRZ8 316 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 ENC1O14682 589 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 PSMA7O14818 248 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 FOXN1O15353 648 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 CYTH3O43739 400 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 FGFR1OPO95684 399 aaKnown RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 B3GALT4O96024 378 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 RPN1P04843 607 aaKnown RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 MYL3P08590 195 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 PDHBP11177 359 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 ATP1A3P13637 1013 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 CPEP16870 476 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 EEF1GP26641 437 aaKnown RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 AFMP43652 599 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 GIPRP48546 466 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 MMP14P50281 582 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 ADCY7P51828 1080 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 PIN1Q13526 163 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 TUBB2AQ13885 445 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 SEPT2Q15019 361 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 MLC1Q15049 377 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 GFOD2Q3B7J2 385 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 ISM2Q6H9L7 571 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 PPP4R3AQ6IN85 833 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 CCDC70Q6NSX1 233 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 RNF180Q86T96 592 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 SPICE1Q8N0Z3 855 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 C17orf53Q8N3J3 647 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 C1orf131Q8NDD1 294 aaKnown RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 DCAF4Q8WV16 495 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 ZNF669Q96BR6 464 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 RHOVQ96L33 236 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 NECAB3Q96P71 396 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 BAG1Q99933 345 aaPredicted RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 TUBB2BQ9BVA1 445 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 IDI2Q9BXS1 227 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 VPS33BQ9H267 617 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 SUGCTQ9HAC7 445 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 RIC8AQ9NPQ8 531 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 NYAP2Q9P242 653 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 PI4KBQ9UBF8 816 aa8.53□□□□□ -1.04
SNX13-208ENST00000482558 LIMA1Q9UHB6 759 aaKnown RBP8.53□□□□□ -1.04
SNX13-208ENST00000482558 A0A087WWV3 80 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 KATNA1O75449 491 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 RHOBTB3O94955 611 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 ESRRAP11474 423 aaPredicted RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 ZNF157P51786 506 aaPredicted RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 ETF1P62495 437 aaKnown RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms