RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 U2AF1L4Q8WU68 220 aaKnown RBP21.47■■□□□ 1.03
CHKB-209ENST00000481673 HNRNPLLQ8WVV9 542 aaKnown RBP21.47■■□□□ 1.03
CHKB-209ENST00000481673 PRPF31Q8WWY3 499 aaKnown RBP21.47■■□□□ 1.03
CHKB-209ENST00000481673 BRI3BPQ8WY22 251 aa21.47■■□□□ 1.03
CHKB-209ENST00000481673 EMID1Q96A84 441 aaPredicted RBP21.47■■□□□ 1.03
CHKB-209ENST00000481673 ERAP1Q9NZ08 941 aa21.47■■□□□ 1.03
CHKB-209ENST00000481673 RAB21Q9UL25 225 aa21.47■■□□□ 1.03
CHKB-209ENST00000481673 LRRC37A2A6NM11 1700 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 CES2O00748 559 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 PALMO75781 387 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 TMEM253P0C7T8 217 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 TFDP1Q14186 410 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 PLCB4Q15147 1175 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 MEI1Q5TIA1 1274 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 CDCA2Q69YH5 1023 aaPredicted RBP21.46■■□□□ 1.03
CHKB-209ENST00000481673 CCDC70Q6NSX1 233 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 CREG2Q8IUH2 290 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 FAM71AQ8IYT1 594 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 AGPAT1Q99943 283 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 TLR10Q9BXR5 811 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 DOCK5Q9H7D0 1870 aa21.46■■□□□ 1.03
CHKB-209ENST00000481673 SRGAP2O75044 1071 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 ERLIN1O75477 346 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 GH1P01241 217 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 ZSCAN20P17040 1043 aaPredicted RBP21.45■■□□□ 1.02
CHKB-209ENST00000481673 AP3M2P53677 418 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 GCNT1Q02742 428 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 SPRYD7Q5W111 196 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 MAMDC4Q6UXC1 1216 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 C15orf39Q6ZRI6 1047 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 GLYCTKQ8IVS8 523 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 ARHGEF19Q8IW93 802 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 SHC3Q92529 594 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 MMS19Q96T76 1030 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 PACSIN1Q9BY11 444 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 MRPL4Q9BYD3 311 aaKnown RBP21.45■■□□□ 1.02
CHKB-209ENST00000481673 POTEJP0CG39 1038 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 DLATP10515 647 aaKnown RBP21.45■■□□□ 1.02
CHKB-209ENST00000481673 ZNF484Q5JVG2 852 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 CCDC181Q5TID7 509 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 PPM1KQ8N3J5 372 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 LNX1Q8TBB1 728 aaPredicted RBP21.45■■□□□ 1.02
CHKB-209ENST00000481673 CTNNBL1Q8WYA6 563 aaPredicted RBP21.45■■□□□ 1.02
CHKB-209ENST00000481673 MSTO1Q9BUK6 570 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 ARFGAP3Q9NP61 516 aa21.45■■□□□ 1.02
CHKB-209ENST00000481673 TARSL2A2RTX5 802 aaKnown RBP21.44■■□□□ 1.02
CHKB-209ENST00000481673 ANKRD62A6NC57 917 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 MAPK4P31152 587 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 NOP2P46087 812 aaKnown RBP21.44■■□□□ 1.02
CHKB-209ENST00000481673 POU5F1BQ06416 359 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 GRM1Q13255 1194 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 FAM110CQ1W6H9 321 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 CFAP221Q4G0U5 840 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 ANKZF1Q9H8Y5 726 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 SLC5A4Q9NY91 659 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 OGFRQ9NZT2 677 aa21.44■■□□□ 1.02
CHKB-209ENST00000481673 CLDN3O15551 220 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 TOM1L1O75674 476 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 PNMA6AP0CW24 399 aaPredicted RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 GZMAP12544 262 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 GALCP54803 685 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 LAMTOR4Q0VGL1 99 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 PRPF4BQ13523 1007 aaKnown RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 MAPK6Q16659 721 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 WDR44Q5JSH3 913 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 TAPT1Q6NXT6 567 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 WDR93Q6P2C0 686 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 MSL3Q8N5Y2 521 aaKnown RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 HELQQ8TDG4 1101 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 RUBCNQ92622 972 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 CAPZA3Q96KX2 299 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 TARS2Q9BW92 718 aaKnown RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 TRPC6Q9Y210 931 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 ADGRA2Q96PE1 1338 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 ZBTB42B2RXF5 422 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 MAGEB2O15479 319 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 LRRN2O75325 713 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 SURF1Q15526 300 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 ZACNQ401N2 412 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 PPTC7Q8NI37 304 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 TAS1R2Q8TE23 839 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 RFFLQ8WZ73 363 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 DHX38Q92620 1227 aaKnown RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 TAF4BQ92750 862 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 SEMA4DQ92854 862 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 POP1Q99575 1024 aaKnown RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 SUGCTQ9HAC7 445 aa21.43■■□□□ 1.02
CHKB-209ENST00000481673 RBAKQ9NYW8 714 aaPredicted RBP21.43■■□□□ 1.02
CHKB-209ENST00000481673 GRID2IPA4D2P6 1211 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 MSCO60682 206 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 TNNI1P19237 187 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 MARK3P27448 753 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 MATR3P43243 847 aaKnown RBP eCLIP21.42■■□□□ 1.02
CHKB-209ENST00000481673 ARHGAP1Q07960 439 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 IRF5Q13568 498 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 TCEAL1Q15170 157 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 DPP9Q86TI2 863 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 RHOT2Q8IXI1 618 aa21.42■■□□□ 1.02
CHKB-209ENST00000481673 MMGT1Q8N4V1 131 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms