RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CARNMT1Q8N4J0 409 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 ALG13Q9NP73 1137 aaKnown RBP12.24□□□□□ -0.45
TRIM27-205ENST00000481474 TARSL2A2RTX5 802 aaKnown RBP12.24□□□□□ -0.45
TRIM27-205ENST00000481474 PPP6R2O75170 966 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 ITGA3P26006 1051 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CHRNA5P30532 468 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 HOXC9P31274 260 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 EPHB4P54760 987 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 NR1H3Q13133 447 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 SNCBQ16143 134 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CYP4A22Q5TCH4 519 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 TMEM270Q6UE05 265 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 STAG2Q8N3U4 1231 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CCDC141Q6ZP82 1450 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 NCF1BA6NI72 391 aaPredicted RBP12.24□□□□□ -0.45
TRIM27-205ENST00000481474 NCF1CA8MVU1 366 aaPredicted RBP12.24□□□□□ -0.45
TRIM27-205ENST00000481474 NCF1P14598 390 aaPredicted RBP12.24□□□□□ -0.45
TRIM27-205ENST00000481474 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 MLH1P40692 756 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 KCNB1Q14721 858 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
TRIM27-205ENST00000481474 NDEL1Q9GZM8 345 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 SNX8Q9Y5X2 465 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 SH3BGRLO75368 114 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 SULT1E1P49888 294 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 C2orf54Q08AI8 447 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 FAM26FQ5R3K3 315 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 C11orf88Q6PI97 169 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 ATP6V1C2Q8NEY4 427 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 SAR1BQ9Y6B6 198 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 THPOP40225 353 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CUL3Q13618 768 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CARTPTQ16568 116 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 GNASQ5JWF2 1037 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 BNIPLQ7Z465 357 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
TRIM27-205ENST00000481474 CTSEP14091 401 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 CAMK1Q14012 370 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 DDX50Q9BQ39 737 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 H0Y3Z8 333 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 CDH18Q13634 790 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 SCFD1Q8WVM8 642 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 EXOC2Q96KP1 924 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MYOCQ99972 504 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ZNF556Q9HAH1 456 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 LOC102724428A0A0B4J2F2 783 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 KIF1CO43896 1103 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 KDM1AO60341 852 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 GRAP2O75791 330 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 H2AFZP0C0S5 128 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 SIK1P57059 783 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MTM1Q13496 603 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ACAP2Q15057 778 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 TRIM71Q2Q1W2 868 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 FAAH2Q6GMR7 532 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 H2AFVQ71UI9 128 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 RBM23Q86U06 439 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 IFNL3Q8IZI9 196 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 RUBCNQ92622 972 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MTBPQ96DY7 904 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 NOS1P29475 1434 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MOXD2PA6NHM9 499 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 SLC16A4O15374 487 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 TAF5Q15542 800 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 PALB2Q86YC2 1186 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 C17orf80Q9BSJ5 609 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 GREM2Q9H772 168 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ZNF302Q9NR11 478 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ABCC5O15440 1437 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ESRRAP11474 423 aaPredicted RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 CDC37Q16543 378 aaPredicted RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 GATAD2AQ86YP4 633 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 PGBD4Q96DM1 585 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 ARHGAP9Q9BRR9 750 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MAGEB5Q9BZ81 275 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 YIPF3Q9GZM5 350 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 POLG2Q9UHN1 485 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 NDUFS3O75489 264 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 EIF2B5Q13144 721 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 TBCKQ8TEA7 893 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
TRIM27-205ENST00000481474 FAM129AQ9BZQ8 928 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 MED4Q9NPJ6 270 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 TNKSO95271 1327 aa12.23□□□□□ -0.45
TRIM27-205ENST00000481474 RAG1P15918 1043 aa12.22□□□□□ -0.45
TRIM27-205ENST00000481474 SLC8A1P32418 973 aa12.22□□□□□ -0.45
TRIM27-205ENST00000481474 CHI3L1P36222 383 aaPredicted RBP12.22□□□□□ -0.45
TRIM27-205ENST00000481474 DSEQ9UL01 958 aa12.22□□□□□ -0.45
TRIM27-205ENST00000481474 AP3D1O14617 1153 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms