RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MDGA1Q8NFP4 955 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 OR7D4Q8NG98 312 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 MDM1Q8TC05 714 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 STAG1Q8WVM7 1258 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 TEKT5Q96M29 485 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 BCO1Q9HAY6 547 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 DNM3Q9UQ16 869 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 GIT1Q9Y2X7 761 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 MRFAP1Q9Y605 127 aa6.96□□□□□ -1.3
CALD1-219ENST00000480638 ZMYM3Q14202 1370 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 MFAP3LO75121 409 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
CALD1-219ENST00000480638 GNAT2P19087 354 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 APBA1Q02410 837 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 SEPT2Q15019 361 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 NOMO1Q15155 1222 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 Q6ZRM9 215 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 PNMA8AQ86V59 439 aaPredicted RBP6.95□□□□□ -1.3
CALD1-219ENST00000480638 TRMT2AQ8IZ69 625 aaKnown RBP6.95□□□□□ -1.3
CALD1-219ENST00000480638 PPM1NQ8N819 430 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.95□□□□□ -1.3
CALD1-219ENST00000480638 REPS2Q8NFH8 660 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 ST8SIA2Q92186 375 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 CEP95Q96GE4 821 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 LSM14BQ9BX40 385 aaKnown RBP6.95□□□□□ -1.3
CALD1-219ENST00000480638 DDX56Q9NY93 547 aaKnown RBP6.95□□□□□ -1.3
CALD1-219ENST00000480638 SPEF1Q9Y4P9 236 aa6.95□□□□□ -1.3
CALD1-219ENST00000480638 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 FAM171A2A8MVW0 826 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 ENDOD1O94919 500 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 SREBF1P36956 1147 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 RABGGTBP53611 331 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 CRHR2Q13324 411 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 C1QL3Q5VWW1 255 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 PDZD4Q76G19 769 aaPredicted RBP6.94□□□□□ -1.3
CALD1-219ENST00000480638 DOK3Q7L591 496 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 THEMISQ8N1K5 641 aaPredicted RBP6.94□□□□□ -1.3
CALD1-219ENST00000480638 OR2I1PQ8NGU4 316 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 NRG4Q8WWG1 115 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 ATXN2LQ8WWM7 1075 aaKnown RBP6.94□□□□□ -1.3
CALD1-219ENST00000480638 UHRF1Q96T88 793 aaPredicted RBP6.94□□□□□ -1.3
CALD1-219ENST00000480638 CPPED1Q9BRF8 314 aaPredicted RBP6.94□□□□□ -1.3
CALD1-219ENST00000480638 PDCD2LQ9BRP1 358 aa6.94□□□□□ -1.3
CALD1-219ENST00000480638 KLRG2A4D1S0 409 aaPredicted RBP6.93□□□□□ -1.3
CALD1-219ENST00000480638 PDGFRBP09619 1106 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 MAN2A2P49641 1150 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 SCNN1GP51170 649 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 ODF1Q14990 250 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 USP39Q53GS9 565 aaKnown RBP6.93□□□□□ -1.3
CALD1-219ENST00000480638 DCAF17Q5H9S7 520 aaPredicted RBP6.93□□□□□ -1.3
CALD1-219ENST00000480638 HTR3DQ70Z44 454 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 FAM83AQ86UY5 434 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 XYLT1Q86Y38 959 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 PQLC1Q8N2U9 271 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.93□□□□□ -1.3
CALD1-219ENST00000480638 SH3RF3Q8TEJ3 882 aaPredicted RBP6.93□□□□□ -1.3
CALD1-219ENST00000480638 CPEB1Q9BZB8 566 aaKnown RBP6.93□□□□□ -1.3
CALD1-219ENST00000480638 SIK3Q9Y2K2 1263 aa6.93□□□□□ -1.3
CALD1-219ENST00000480638 PTPN7P35236 360 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 WASP42768 502 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 SLC6A9P48067 706 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 FLT3LGP49771 235 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 PER3P56645 1201 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 RRP1BQ14684 758 aaKnown RBP6.92□□□□□ -1.3
CALD1-219ENST00000480638 MFSD14BQ5SR56 506 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 RNF207Q6ZRF8 634 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 ZNF572Q7Z3I7 529 aaPredicted RBP6.92□□□□□ -1.3
CALD1-219ENST00000480638 SPRED1Q7Z699 444 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 GSPT2Q8IYD1 628 aaKnown RBP6.92□□□□□ -1.3
CALD1-219ENST00000480638 FBXO18Q8NFZ0 1043 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 OR52N2Q8NGI0 321 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 DPF2Q92785 391 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 EXTL1Q92935 676 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 GPR87Q9BY21 358 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 LANCL2Q9NS86 450 aa6.92□□□□□ -1.3
CALD1-219ENST00000480638 B5MCH6 92 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 WNT10BO00744 389 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 INSRRP14616 1297 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 HSP90B1P14625 803 aaKnown RBP6.91□□□□□ -1.3
CALD1-219ENST00000480638 HK1P19367 917 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 CCND1P24385 295 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 GUCY1A2P33402 732 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 NEK2P51955 445 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 SLC16A1P53985 500 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 EFCAB2Q5VUJ9 269 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 ANKS6Q68DC2 871 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 GPRIN1Q7Z2K8 1008 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 ZBTB46Q86UZ6 589 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 IL17DQ8TAD2 202 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 CHMP4CQ96CF2 233 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 PGBD4Q96DM1 585 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 KCNH6Q9H252 994 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 AURKAIP1Q9NWT8 199 aaPredicted RBP6.91□□□□□ -1.3
CALD1-219ENST00000480638 SAP30BPQ9UHR5 308 aaKnown RBP6.91□□□□□ -1.3
CALD1-219ENST00000480638 INTUQ9ULD6 942 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 HDAC5Q9UQL6 1122 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 MYRFQ9Y2G1 1151 aa6.91□□□□□ -1.3
CALD1-219ENST00000480638 KIF23Q02241 960 aaPredicted RBP6.9□□□□□ -1.3
CALD1-219ENST00000480638 SP140Q13342 867 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms