RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ADRB2P07550 413 aa19.16■□□□□ 0.66
UPF3A-206ENST00000480362 KRT13P13646 458 aa19.16■□□□□ 0.66
UPF3A-206ENST00000480362 ATN1P54259 1190 aaPredicted RBP19.16■□□□□ 0.66
UPF3A-206ENST00000480362 SNRNP35Q16560 246 aaKnown RBP19.16■□□□□ 0.66
UPF3A-206ENST00000480362 ZNF568Q3ZCX4 644 aa19.16■□□□□ 0.66
UPF3A-206ENST00000480362 FAM26DQ5JW98 314 aa19.16■□□□□ 0.66
UPF3A-206ENST00000480362 DIS3LQ8TF46 1054 aaKnown RBP19.16■□□□□ 0.66
UPF3A-206ENST00000480362 PDZD7Q9H5P4 517 aa19.16■□□□□ 0.66
UPF3A-206ENST00000480362 NOC2LQ9Y3T9 749 aaKnown RBP19.16■□□□□ 0.66
UPF3A-206ENST00000480362 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.16■□□□□ 0.66
UPF3A-206ENST00000480362 ZNF233A6NK53 670 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 LGALS16A8MUM7 142 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 CAND2O75155 1236 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 CD4P01730 458 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 COL6A1P12109 1028 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 CDC25BP30305 580 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 HOXA11P31270 313 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-206ENST00000480362 ACOT2P49753 483 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 UBXN1Q04323 297 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 HSP90AA2PQ14568 343 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-206ENST00000480362 NOLC1Q14978 699 aaKnown RBP eCLIP19.15■□□□□ 0.66
UPF3A-206ENST00000480362 ZNF618Q5T7W0 954 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 TCERG1LQ5VWI1 586 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 CRELD2Q6UXH1 353 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-206ENST00000480362 INTS8Q75QN2 995 aaKnown RBP19.15■□□□□ 0.66
UPF3A-206ENST00000480362 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-206ENST00000480362 MFSD14AQ96MC6 490 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 CDT1Q9H211 546 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 NDST4Q9H3R1 872 aa19.15■□□□□ 0.66
UPF3A-206ENST00000480362 OGTO15294 1046 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 TLR3O15455 904 aaKnown RBP19.14■□□□□ 0.65
UPF3A-206ENST00000480362 RPS6KA5O75582 802 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 CKBP12277 381 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 CAPN2P17655 700 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 AXLP30530 894 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
UPF3A-206ENST00000480362 PPP2R3AQ06190 1150 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 CCDC173Q0VFZ6 552 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 KCNH2Q12809 1159 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 BFSP1Q12934 665 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 PTPN21Q16825 1174 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 SEZ6Q53EL9 994 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 DCAF17Q5H9S7 520 aaPredicted RBP19.14■□□□□ 0.65
UPF3A-206ENST00000480362 ZBTB41Q5SVQ8 909 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 FAM228AQ86W67 206 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 DRC7Q8IY82 874 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 PDLIM2Q96JY6 352 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 C11orf49Q9H6J7 331 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 MROH7Q68CQ1 1323 aa19.14■□□□□ 0.65
UPF3A-206ENST00000480362 RBAK-RBAKDNI3L0D1 243 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 TULP1O00294 542 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-206ENST00000480362 FAM189A1O60320 539 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 PQBP1O60828 265 aaKnown RBP19.13■□□□□ 0.65
UPF3A-206ENST00000480362 MCF2P10911 925 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 VAMP7P51809 220 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 CYP24A1Q07973 514 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 FBXO47Q5MNV8 452 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 FKBP15Q5T1M5 1219 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 NOTUMQ6P988 496 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 THNSL1Q8IYQ7 743 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 PLEKHO2Q8TD55 490 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 SLC35C1Q96A29 364 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 PAWRQ96IZ0 340 aaKnown RBP19.13■□□□□ 0.65
UPF3A-206ENST00000480362 ADPGKQ9BRR6 497 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 AGPAT5Q9NUQ2 364 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 ST3GAL5Q9UNP4 418 aa19.13■□□□□ 0.65
UPF3A-206ENST00000480362 AFPP02771 609 aaKnown RBP19.12■□□□□ 0.65
UPF3A-206ENST00000480362 TRIM49P0CI25 452 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 TRIM49CP0CI26 452 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 TNFSF9P41273 254 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 MCCD1P59942 119 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-206ENST00000480362 DLG4P78352 724 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 C1orf53Q5VUE5 145 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 ANKRD33Q7Z3H0 272 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 VSTM4Q8IW00 320 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 CCDC155Q8N6L0 562 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 CAGE1Q8TC20 777 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 TMC2Q8TDI7 906 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 PPP1R9BQ96SB3 815 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 OSBPL7Q9BZF2 842 aa19.12■□□□□ 0.65
UPF3A-206ENST00000480362 AGO3Q9H9G7 860 aaKnown RBP19.12■□□□□ 0.65
UPF3A-206ENST00000480362 CPSF3Q9UKF6 684 aaKnown RBP19.12■□□□□ 0.65
UPF3A-206ENST00000480362 PIN4Q9Y237 131 aaKnown RBP19.12■□□□□ 0.65
UPF3A-206ENST00000480362 DCDC2CA8MYV0 355 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 GPR182O15218 404 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 NPTXRO95502 500 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 GHRP10912 638 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 PBX1P40424 430 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 RBL2Q08999 1139 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 NFX1Q12986 1120 aaKnown RBP19.11■□□□□ 0.65
UPF3A-206ENST00000480362 BFSP2Q13515 415 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 LPIN1Q14693 890 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 DCAF4L1Q3SXM0 396 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 TRIM60Q495X7 471 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 SLC27A1Q6PCB7 646 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 TRAF7Q6Q0C0 670 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 TMC6Q7Z403 805 aa19.11■□□□□ 0.65
UPF3A-206ENST00000480362 APBB1IPQ7Z5R6 666 aaPredicted RBP19.11■□□□□ 0.65
UPF3A-206ENST00000480362 CEP120Q8N960 986 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms