RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 COL1A2P08123 1366 aa5.54□□□□□ -1.52
PTCD3-213ENST00000480102 MYH4Q9Y623 1939 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 ABHD14A-ACY1A0A1B0GW23 586 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 WDR64B1ANS9 1081 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 SOX1O00570 391 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 EIF1AYO14602 144 aaKnown RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 EDIL3O43854 480 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 B4GALT4O60513 344 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PQBP1O60828 265 aaKnown RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 DKC1O60832 514 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PSMD10O75832 226 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 LYPLA2O95372 231 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 MMP1P03956 469 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 LGALS2P05162 132 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 ESRRAP11474 423 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 MYCLP12524 364 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 FDPSP14324 419 aaKnown RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 CPA1P15085 419 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 FXR1P51114 621 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 JAK3P52333 1124 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 NLRP12P59046 1061 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 NLRP5P59047 1200 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 BEX3Q00994 111 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PPP2R5CQ13362 524 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 NONOQ15233 471 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PCBP1Q15365 356 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 KIAA0753Q2KHM9 967 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 TRIM71Q2Q1W2 868 aaKnown RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 KIAA0319Q5VV43 1072 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 ANO1Q5XXA6 986 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 HGSNATQ68CP4 663 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 MIS18BP1Q6P0N0 1132 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 ABHD15Q6UXT9 468 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PRR23CQ6ZRP0 262 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 CYFIP1Q7L576 1253 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 TMC7Q7Z402 723 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 BLIDQ8IZY5 108 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 FBXO18Q8NFZ0 1043 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 ETNPPLQ8TBG4 499 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 APBB2Q92870 758 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PHKBQ93100 1093 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 FERMT2Q96AC1 680 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 INTS4Q96HW7 963 aaKnown RBP5.53□□□□□ -1.52
PTCD3-213ENST00000480102 FAM167AQ96KS9 214 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 CEP41Q9BYV8 373 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 BACH2Q9BYV9 841 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 AZI2Q9H6S1 392 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 CEP131Q9UPN4 1083 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 PCDHA10Q9Y5I2 948 aa5.53□□□□□ -1.52
PTCD3-213ENST00000480102 IGSF9BQ9UPX0 1349 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 A0A096LPE4 126 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 SMIM35A0A1B0GVV1 85 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 A0A1W2PPZ6 126 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 GSTTP1A0A1W2PQM5 241 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 C17orf102A2RUQ5 167 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 LAD1O00515 517 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 MAGEB2O15479 319 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 SLC26A4O43511 780 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 GAS2O43903 313 aaKnown RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 HBP1O60381 514 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ATP9AO75110 1047 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 MYL3P08590 195 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 IQCF3P0C7M6 154 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ACTN1P12814 892 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 XRCC6P12956 609 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ITGB8P26012 769 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 U2AF2P26368 475 aaKnown RBP eCLIP5.52□□□□□ -1.531e-7■□□□□ 8
PTCD3-213ENST00000480102 GRIA4P48058 902 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 STAT5BP51692 787 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ACTR2P61160 394 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ITGB3BPQ13352 177 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 CUL4AQ13619 759 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 PTGISQ16647 500 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 UBE2SQ16763 222 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 UVSSAQ2YD98 709 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF484Q5JVG2 852 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 TMEM63BQ5T3F8 832 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 FAM160B1Q5W0V3 765 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 DNAJC14Q6Y2X3 702 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 NEK8Q86SG6 692 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 RSPH3Q86UC2 560 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 PLA2G4DQ86XP0 818 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 SLFN12Q8IYM2 578 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 NEK9Q8TD19 979 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 TBCKQ8TEA7 893 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ATP8B4Q8TF62 1192 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 COPS5Q92905 334 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 BADQ92934 168 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 KCNN1Q92952 543 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 VWCEQ96DN2 955 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 UBL7Q96S82 380 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 SLC9A7Q96T83 725 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 JPH2Q9BR39 696 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ZNF577Q9BSK1 485 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 ALG1Q9BT22 464 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 WNT8AQ9H1J5 351 aa5.52□□□□□ -1.53
PTCD3-213ENST00000480102 NCOA5Q9HCD5 579 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms