RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CASP4P49662 377 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 ACOT2P49753 483 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 Q3C1V9 767 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 BBS9Q3SYG4 887 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 ANGEL2Q5VTE6 544 aaKnown RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 PDIK1LQ8N165 341 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 NOP53Q9NZM5 478 aaKnown RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 ARHGAP20Q9P2F6 1191 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 GPC3P51654 580 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 POLE2P56282 527 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 TTLL4Q14679 1199 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 DUOXA2Q1HG44 320 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 NBPF9Q3BBW0 867 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 Q4G0T1 1027 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 TRIM59Q8IWR1 403 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 MOV10L1Q9BXT6 1211 aaKnown RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.28■□□□□ 0.04
COL20A1-206ENST00000479501 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 PPP1R9AQ9ULJ8 1098 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 USH1CQ9Y6N9 552 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 CAPN6Q9Y6Q1 641 aa15.28■□□□□ 0.04
COL20A1-206ENST00000479501 KIAA0391O15091 583 aaKnown RBP15.27■□□□□ 0.04
COL20A1-206ENST00000479501 EFNA5P52803 228 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 PMS2P54278 862 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 IDI2Q9BXS1 227 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 GOLPH3Q9H4A6 298 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 PON1P27169 355 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 MAGOHP61326 146 aaKnown RBP15.27■□□□□ 0.04
COL20A1-206ENST00000479501 HERVK_113P62684 666 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 DHX34Q14147 1143 aaKnown RBP15.27■□□□□ 0.04
COL20A1-206ENST00000479501 RHOT1Q8IXI2 618 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 MMGT1Q8N4V1 131 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 RNF149Q8NC42 400 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 NSMCE1Q8WV22 266 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL20A1-206ENST00000479501 VCX3AQ9NNX9 186 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 SCOCQ9UIL1 159 aa15.27■□□□□ 0.04
COL20A1-206ENST00000479501 TMEM253P0C7T8 217 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 MYBL1P10243 752 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 MSH2P43246 934 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 PSMC6P62333 389 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 ACTN3Q08043 901 aaPredicted RBP15.27■□□□□ 0.03
COL20A1-206ENST00000479501 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.03
COL20A1-206ENST00000479501 XRRA1Q6P2D8 792 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 CENPUQ71F23 418 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 SPATA33Q96N06 139 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 STRIP2Q9ULQ0 834 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 TNFAIP2Q03169 654 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 ZFPM1Q8IX07 1006 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.03
COL20A1-206ENST00000479501 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.03
COL20A1-206ENST00000479501 ELAC2Q9BQ52 826 aaKnown RBP15.27■□□□□ 0.03
COL20A1-206ENST00000479501 XRN1Q8IZH2 1706 aaKnown RBP15.26■□□□□ 0.03
COL20A1-206ENST00000479501 P4HA2O15460 535 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 SKIP12755 728 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 CDO1Q16878 200 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 TKFCQ3LXA3 575 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 DACT2Q5SW24 774 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 ATP6V1G3Q96LB4 118 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 PNKPQ96T60 521 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 UVRAGQ9P2Y5 699 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 GGPS1O95749 300 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 MUTP22033 750 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 ARL4AP40617 200 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 PRKCEQ02156 737 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 CYP2W1Q8TAV3 490 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 FBXO41Q8TF61 875 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 SLC16A10Q8TF71 515 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 PYROXD1Q8WU10 500 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 CDKL2Q92772 493 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 NACA2Q9H009 215 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 Q9H521 79 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 LRRC4Q9HBW1 653 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 MED1Q15648 1581 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-206ENST00000479501 TTI1O43156 1089 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 AKAP3O75969 853 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 RPS12P25398 132 aaKnown RBP15.26■□□□□ 0.03
COL20A1-206ENST00000479501 IFRD2Q12894 506 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-206ENST00000479501 PAPD7Q5XG87 772 aaKnown RBP15.26■□□□□ 0.03
COL20A1-206ENST00000479501 OR6B3Q8NGW1 331 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 RIN2Q8WYP3 895 aaPredicted RBP15.26■□□□□ 0.03
COL20A1-206ENST00000479501 SLC24A3Q9HC58 644 aa15.26■□□□□ 0.03
COL20A1-206ENST00000479501 AP3M2P53677 418 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 NUGGCQ68CJ6 796 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 RSPH3Q86UC2 560 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 C1orf54Q8WWF1 131 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 SEPT1Q8WYJ6 367 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 MTMR9Q96QG7 549 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 TXLNGQ9NUQ3 528 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 INTS13Q9NVM9 706 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 FAF1Q9UNN5 650 aaPredicted RBP15.25■□□□□ 0.03
COL20A1-206ENST00000479501 SLC12A2P55011 1212 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 SNRPFP62306 86 aaKnown RBP15.25■□□□□ 0.03
COL20A1-206ENST00000479501 CAV1Q03135 178 aa15.25■□□□□ 0.03
COL20A1-206ENST00000479501 HSP90AA5PQ58FG0 334 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms