RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 ZNF623O75123 536 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 CCNE1P24864 410 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 SOX9P48436 509 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 DSC1Q08554 894 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 RTP2Q5QGT7 225 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 PPM1LQ5SGD2 360 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 DEFB124Q8NES8 71 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 KRT23Q9C075 422 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 FNIP2Q9P278 1114 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 MSRB2Q9Y3D2 182 aa13.83□□□□□ -0.2
HDAC8-217ENST00000478743 NUP205Q92621 2012 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 LNP1A1A4G5 178 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 MAN2B1O00754 1011 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 MAGEB2O15479 319 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 C1QL1O75973 258 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 HNRNPA1P09651 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC8-217ENST00000478743 NT5C2P49902 561 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 UGCGQ16739 394 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 PABPC1LQ4VXU2 614 aaKnown RBP13.82□□□□□ -0.2
HDAC8-217ENST00000478743 CEP55Q53EZ4 464 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 MIS18BP1Q6P0N0 1132 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 MAP4K3Q8IVH8 894 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 SLC7A14Q8TBB6 771 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 GAB3Q8WWW8 586 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
HDAC8-217ENST00000478743 LOXL4Q96JB6 756 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 CLSTN3Q9BQT9 956 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 BRD9Q9H8M2 597 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 ZNF334Q9HCZ1 680 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-217ENST00000478743 ANKFY1Q9P2R3 1169 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 GABBR1Q9UBS5 961 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 UNC79Q9P2D8 2635 aa13.82□□□□□ -0.2
HDAC8-217ENST00000478743 TMEM150BA6NC51 233 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 FAM86B1E9PN63 330 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 MEIS1O00470 390 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 EXTL3O43909 919 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 RPP40O75818 363 aaKnown RBP13.81□□□□□ -0.2
HDAC8-217ENST00000478743 FAM86B2P0C5J1 330 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 TXNDC11Q6PKC3 985 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 VITQ6UXI7 678 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 MRPL10Q7Z7H8 261 aaKnown RBP13.81□□□□□ -0.2
HDAC8-217ENST00000478743 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
HDAC8-217ENST00000478743 ELSPBP1Q96BH3 223 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 SH2D3AQ9BRG2 576 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 GCOM2Q9BZD3 368 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-217ENST00000478743 VPS45Q9NRW7 570 aa13.81□□□□□ -0.2
HDAC8-217ENST00000478743 POLR3BQ9NW08 1133 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-217ENST00000478743 C1RP00736 705 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 SKIP12755 728 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 SFPQP23246 707 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDAC8-217ENST00000478743 TMOD1P28289 359 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 GDI1P31150 447 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 MLH1P40692 756 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 RAB27AP51159 221 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 SCNN1GP51170 649 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
HDAC8-217ENST00000478743 TYW1BQ6NUM6 668 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 SMG8Q8ND04 991 aaKnown RBP13.8□□□□□ -0.2
HDAC8-217ENST00000478743 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 ZFP42Q96MM3 310 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 IL25Q9H293 177 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.8□□□□□ -0.2
HDAC8-217ENST00000478743 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
HDAC8-217ENST00000478743 MRPS23Q9Y3D9 190 aaKnown RBP13.8□□□□□ -0.2
HDAC8-217ENST00000478743 ASCC3Q8N3C0 2202 aaKnown RBP13.8□□□□□ -0.2
HDAC8-217ENST00000478743 IGLV3-22A0A075B6J6 115 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 SPAARA0A1B0GVQ0 90 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 ARNTLO00327 626 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 CDX4O14627 284 aaPredicted RBP13.79□□□□□ -0.2
HDAC8-217ENST00000478743 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
HDAC8-217ENST00000478743 OATP04181 439 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 MS4A1P11836 297 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 CEACAM1P13688 526 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 HOXA9P31269 272 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 PDE1AP54750 535 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 PRKCEQ02156 737 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 FAM78AQ5JUQ0 283 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 HNRNPLLQ8WVV9 542 aaKnown RBP13.79□□□□□ -0.2
HDAC8-217ENST00000478743 GAD1Q99259 594 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 ANO3Q9BYT9 981 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 KCNH3Q9ULD8 1083 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 CEP131Q9UPN4 1083 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 HES2Q9Y543 173 aa13.79□□□□□ -0.2
HDAC8-217ENST00000478743 PCDHGA5Q9Y5G8 931 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms