RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 DEPTORQ8TB45 409 aa20.7■□□□□ 0.9
SREBF1-212ENST00000478616 MICAL1Q8TDZ2 1067 aa20.7■□□□□ 0.9
SREBF1-212ENST00000478616 EPSTI1Q96J88 318 aa20.7■□□□□ 0.9
SREBF1-212ENST00000478616 CLIC6Q96NY7 704 aa20.7■□□□□ 0.9
SREBF1-212ENST00000478616 TMEM175Q9BSA9 504 aa20.7■□□□□ 0.9
SREBF1-212ENST00000478616 NTPCRQ9BSD7 190 aaKnown RBP20.7■□□□□ 0.9
SREBF1-212ENST00000478616 SNTG2Q9NY99 539 aa20.7■□□□□ 0.9
SREBF1-212ENST00000478616 STX6O43752 255 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 PLCG1P19174 1290 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 MARCKSP29966 332 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-212ENST00000478616 COASYQ13057 564 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 PPP2R5AQ15172 486 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 VPS52Q8N1B4 723 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 CEP120Q8N960 986 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 URGCPQ8TCY9 931 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 PAAF1Q9BRP4 392 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 NGRNQ9NPE2 291 aaKnown RBP20.69■□□□□ 0.9
SREBF1-212ENST00000478616 UBN1Q9NPG3 1134 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 ENTPD7Q9NQZ7 604 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 ZMYM2Q9UBW7 1377 aa20.69■□□□□ 0.9
SREBF1-212ENST00000478616 N4BP3O15049 544 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 CLASP2O75122 1294 aaKnown RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 CTSAP10619 480 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 LIG1P18858 919 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 PROZP22891 400 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 LONP1P36776 959 aaKnown RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 RNASELQ05823 741 aaKnown RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 SMAD2Q15796 467 aaKnown RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 TMC7Q7Z402 723 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 KCTD17Q8N5Z5 321 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 SMRP1Q8NCR6 262 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 RABGGTAQ92696 567 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 TMEM169Q96HH4 297 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 IFT74Q96LB3 600 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 ACO2Q99798 780 aaKnown RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 CCSER1Q9C0I3 900 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 S1PR5Q9H228 398 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 TMEM134Q9H6X4 195 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 KANSL3Q9P2N6 904 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 PUF60Q9UHX1 559 aaKnown RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 CDH22Q9UJ99 828 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 IRAK3Q9Y616 596 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 MORC2Q9Y6X9 1032 aaPredicted RBP20.68■□□□□ 0.9
SREBF1-212ENST00000478616 C2orf16Q68DN1 1984 aa20.68■□□□□ 0.9
SREBF1-212ENST00000478616 C19orf67A6NJJ6 358 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 SLC16A4O15374 487 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 SLC26A4O43511 780 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 RECQL4O94761 1208 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 BMP15O95972 392 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 NDUFV1P49821 464 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 EFNA5P52803 228 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 KRT17Q04695 432 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 ZP2Q05996 745 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 SMAD4Q13485 552 aaKnown RBP20.67■□□□□ 0.9
SREBF1-212ENST00000478616 PKP1Q13835 747 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 MCM6Q14566 821 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 PTPN14Q15678 1187 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 ATF7IP2Q5U623 682 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 TMEM161BQ8NDZ6 487 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 SPIRE2Q8WWL2 714 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 FIZ1Q96SL8 496 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 HAPLN2Q9GZV7 340 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 NT5C3AQ9H0P0 336 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 CD207Q9UJ71 328 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 TNFSF13BQ9Y275 285 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 PRG3Q9Y2Y8 225 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-212ENST00000478616 SRPRBQ9Y5M8 271 aaKnown RBP20.67■□□□□ 0.9
SREBF1-212ENST00000478616 PHLPP2Q6ZVD8 1323 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 DENND4AQ7Z401 1863 aa20.67■□□□□ 0.9
SREBF1-212ENST00000478616 A0A087X0B3 334 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 CCDC169A6NNP5 214 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 SSBP05455 408 aaKnown RBP eCLIP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 CEBPZQ03701 1054 aaKnown RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 NCBP1Q09161 790 aaKnown RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 SMC1AQ14683 1233 aaKnown RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 SLC22A17Q8WUG5 538 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 SUSD6Q92537 303 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 RAD54LQ92698 747 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 KCNN1Q92952 543 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 ZBTB45Q96K62 511 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 DRC1Q96MC2 740 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 CDCA3Q99618 268 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 REEP2Q9BRK0 252 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 TARS2Q9BW92 718 aaKnown RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 TRIM6Q9C030 488 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 CDT1Q9H211 546 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 PARP2Q9UGN5 583 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 FAN1Q9Y2M0 1017 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 HCFC2Q9Y5Z7 792 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 ANK1P16157 1881 aa20.66■□□□□ 0.9
SREBF1-212ENST00000478616 MTCL1Q9Y4B5 1905 aaKnown RBP20.66■□□□□ 0.9
SREBF1-212ENST00000478616 K7ERI5 159 aa20.65■□□□□ 0.9
SREBF1-212ENST00000478616 CXCL14O95715 111 aa20.65■□□□□ 0.9
SREBF1-212ENST00000478616 ALDH2P05091 517 aa20.65■□□□□ 0.9
SREBF1-212ENST00000478616 MAPTP10636 758 aaKnown RBP20.65■□□□□ 0.9
SREBF1-212ENST00000478616 PLS3P13797 630 aa20.65■□□□□ 0.9
SREBF1-212ENST00000478616 UBA7P41226 1012 aa20.65■□□□□ 0.9
SREBF1-212ENST00000478616 NASPP49321 788 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-212ENST00000478616 ZNF131P52739 623 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms