RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 DDX42Q86XP3 938 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 MCPH1Q8NEM0 835 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 EPS8L1Q8TE68 723 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 SCFD2Q8WU76 684 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 LMBR1Q8WVP7 490 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 CDHR1Q96JP9 859 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 PBKQ96KB5 322 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 BTBD6Q96KE9 485 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 MFSD14AQ96MC6 490 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 PCYT2Q99447 389 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 GDF3Q9NR23 364 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 ARHGAP28Q9P2N2 729 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 NOCTQ9UK39 431 aaKnown RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 AMFRQ9UKV5 643 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 PPP2R3BQ9Y5P8 575 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 ANKRD62A6NC57 917 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 DDX3YO15523 660 aaKnown RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 PGK2P07205 417 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 AARSP49588 968 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 SNRPFP62306 86 aaKnown RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 PPARDQ03181 441 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 DRP2Q13474 957 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 LY6KQ17RY6 165 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 GLE1Q53GS7 698 aaKnown RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 GPD1LQ8N335 351 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 FAM71BQ8TC56 605 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 ACTRT1Q8TDG2 376 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 IFT74Q96LB3 600 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 FBXL18Q96ME1 805 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 TMEM8AQ9HCN3 771 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 RAB20Q9NX57 234 aa9.58□□□□□ -0.88
CDHR3-211ENST00000478080 MAFBQ9Y5Q3 323 aaPredicted RBP9.58□□□□□ -0.88
CDHR3-211ENST00000478080 GSTTP1A0A1W2PQM5 241 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 GOLGA6BA6NDN3 693 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 LRRIQ4A6NIV6 560 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 PGRMC1O00264 195 aaKnown RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 KRIT1O00522 736 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 OATP04181 439 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 RFX1P22670 979 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 GLRA2P23416 452 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 MARCKSL1P49006 195 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 LIG4P49917 911 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 NLRP11P59045 1033 aaKnown RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 IFT20Q8IY31 132 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SYCE1Q8N0S2 351 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SLC17A8Q8NDX2 589 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 FBXL13Q8NEE6 735 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 CHST13Q8NET6 341 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ALG3Q92685 438 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SPATC1LQ9H0A9 340 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ACBD3Q9H3P7 528 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 FAM204AQ9H8W3 233 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 C17orf75Q9HAS0 396 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 CTTNBP2NLQ9P2B4 639 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 AMACRQ9UHK6 382 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 CSADQ9Y600 493 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 PTPRJQ12913 1337 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ANKRD65E5RJM6 399 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SART1O43290 800 aaKnown RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 STAM2O75886 525 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 FARP2O94887 1054 aaPredicted RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ATG7O95352 703 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 FGGP02679 453 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 CYP11B1P15538 503 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 GPC3P51654 580 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 EPHB4P54760 987 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 MFAP3P55082 362 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ERVK-9P63128 1117 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 FMO1Q01740 532 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 BRDTQ58F21 947 aaPredicted RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 TMEM63BQ5T3F8 832 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SPOPLQ6IQ16 392 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 PHLDB2Q86SQ0 1253 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SULF1Q8IWU6 871 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 DNERQ8NFT8 737 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 SHC3Q92529 594 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 KRT35Q92764 455 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 DCPSQ96C86 337 aaKnown RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 HVCN1Q96D96 273 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 CELF4Q9BZC1 486 aaKnown RBP9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ISCUQ9H1K1 167 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 TXNRD2Q9NNW7 524 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 ALG6Q9Y672 507 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 PTPRFP10586 1907 aa9.57□□□□□ -0.88
CDHR3-211ENST00000478080 CES2O00748 559 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 ARIH2O95376 493 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 HARSP12081 509 aaKnown RBP9.56□□□□□ -0.88
CDHR3-211ENST00000478080 KRT5P13647 590 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 MARK3P27448 753 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
CDHR3-211ENST00000478080 TNNC1P63316 161 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 MESDQ14696 234 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 Q3C1V9 767 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 TRIM50Q86XT4 487 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 RIOX2Q8IUF8 465 aa9.56□□□□□ -0.88
CDHR3-211ENST00000478080 RASGEF1CQ8N431 466 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms