RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TTC19Q6DKK2 380 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 IL31Q6EBC2 164 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 TATDN1Q6P1N9 297 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 SLC4A10Q6U841 1118 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PACS1Q6VY07 963 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 SYNE3Q6ZMZ3 975 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 ETV3LQ6ZN32 361 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 DBX2Q6ZNG2 339 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 RSRC2Q7L4I2 434 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 OTOP3Q7RTS5 596 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 BRAPQ7Z569 592 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 ANKLE2Q86XL3 938 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 MIB1Q86YT6 1006 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 LURAP1LQ8IV03 231 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 IGDCC3Q8IVU1 814 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 ZC3H7AQ8IWR0 971 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 RBM12BQ8IXT5 1001 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 CCAR2Q8N163 923 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 NAXEQ8NCW5 288 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 LILRB1Q8NHL6 650 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PCDH19Q8TAB3 1148 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 GSDMBQ8TAX9 411 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 SLC7A14Q8TBB6 771 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PIP4K2CQ8TBX8 421 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PHOSPHO1Q8TCT1 267 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PANK1Q8TE04 598 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 ANKRD49Q8WVL7 239 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 CPA5Q8WXQ8 436 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 SNX21Q969T3 373 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 FBXW5Q969U6 566 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 JAKMIP2Q96AA8 810 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 CHMP4CQ96CF2 233 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 RTFDC1Q9BY42 306 aaPredicted RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 RHOBTB2Q9BYZ6 727 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 SMOC1Q9H4F8 434 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PLCB1Q9NQ66 1216 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 TBC1D22BQ9NU19 505 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 OBP2AQ9NY56 170 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PSD3Q9NYI0 1048 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 AIPL1Q9NZN9 384 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 MYOTQ9UBF9 498 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 SMG5Q9UPR3 1016 aaKnown RBP3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 TMX2Q9Y320 296 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PCDHB4Q9Y5E5 795 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 PCDHA9Q9Y5H5 950 aa3.96□□□□□ -1.78
FNDC3B-209ENST00000478016 WRNQ14191 1432 aaPredicted RBP eCLIP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 SHROOM2Q13796 1616 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 SYNJ2BP-COX16A0A087WUM0 186 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TCRBV5S2A0A599 114 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM64A6NGJ6 449 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM64BA6NI03 449 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 NPIPB6E9PJ23 425 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 RFXAPO00287 272 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CASQ2O14958 399 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 MUSKO15146 869 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 BUB1BO60566 1050 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 KPNA6O60684 536 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 INMTO95050 263 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TSPY4P0CV99 314 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TSPY10P0CW01 314 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 SRGAP2CP0DJJ0 459 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 GZMAP12544 262 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 P4HA1P13674 534 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 IGFBP6P24592 240 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 HPDP32754 393 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 HOXD12P35452 270 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 USP8P40818 1118 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 PRPHP41219 470 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 MRE11P49959 708 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 NEK3P51956 506 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 HSD17B7P56937 341 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 GJA9P57773 515 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 MRPL28Q13084 256 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 ACAP1Q15027 740 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CNGA3Q16281 694 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TM4SF20Q53R12 229 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 FAM47CQ5HY64 1035 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 HABP4Q5JVS0 413 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CXorf57Q6NSI4 855 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM48Q8IWZ4 208 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CHAC2Q8WUX2 184 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CHFRQ96EP1 664 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 DDX11Q96FC9 970 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 CFAP36Q96G28 342 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 DHTKD1Q96HY7 919 aaPredicted RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 RSRC1Q96IZ7 334 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 C8orf76Q96K31 380 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 ZMAT2Q96NC0 199 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 GBP4Q96PP9 640 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 SLC39A3Q9BRY0 314 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 YIPF4Q9BSR8 244 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 PI4K2AQ9BTU6 479 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 LSM14BQ9BX40 385 aaKnown RBP3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 SLC7A5P2Q9GIP4 190 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 UNC45AQ9H3U1 944 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 VEZTQ9HBM0 779 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 GOLGA2P5Q9HBQ8 144 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIM39Q9HCM9 518 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 ZNF304Q9HCX3 659 aa3.95□□□□□ -1.78
FNDC3B-209ENST00000478016 ALG13Q9NP73 1137 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms