RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 USP41Q3LFD5 358 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 TSGA10IPQ3SY00 556 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 UBXN11Q5T124 520 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 FUT10Q6P4F1 479 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NOTUMQ6P988 496 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 PRSS55Q6UWB4 352 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CYP26C1Q6V0L0 522 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 OTUD6AQ7L8S5 288 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 GRASPQ7Z6J2 395 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 MRPL10Q7Z7H8 261 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CDR2LQ86X02 465 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 C1orf210Q8IVY1 113 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 EXOC8Q8IYI6 725 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 PJA1Q8NG27 643 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 ETNPPLQ8TBG4 499 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 RUBCNQ92622 972 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NXPE3Q969Y0 559 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 SHDQ96IW2 340 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CEP89Q96ST8 783 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 LARP6Q9BRS8 491 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 LXNQ9BS40 222 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 BCO2Q9BYV7 579 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NT5C3AQ9H0P0 336 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NXF3Q9H4D5 531 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 PLEKHA4Q9H4M7 779 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 EPS15L1Q9UBC2 864 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CACNG4Q9UBN1 327 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 PARP2Q9UGN5 583 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 SNX14Q9Y5W7 946 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NID2Q14112 1375 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CASTOR2A6NHX0 329 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 POTEMA6NI47 508 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CCL16O15467 120 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 TSPAN1O60635 241 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 P4HBP07237 508 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 LIG1P18858 919 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 PSMA5P28066 241 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 PDIA3P30101 505 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 HOXA11P31270 313 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 GPC5P78333 572 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 NTHL1P78549 312 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CREMQ03060 361 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CSTF1Q05048 431 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 HTR4Q13639 388 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CTTNQ14247 550 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 NTRK3Q16288 839 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 RSPO4Q2I0M5 234 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 PPM1LQ5SGD2 360 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 KIAA0319Q5VV43 1072 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 PHLDB3Q6NSJ2 640 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CPLX2Q6PUV4 134 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 POTEGQ6S5H5 508 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 PARM1Q6UWI2 310 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 FERMT3Q86UX7 667 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 TPH2Q8IWU9 490 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 FGF14Q92915 247 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 SECISBP2LQ93073 1101 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 ZNF707Q96C28 371 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 DYDC2Q96IM9 177 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 AIFM3Q96NN9 605 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 KXD1Q9BQD3 176 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 PRKD2Q9BZL6 878 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 DHX33Q9H6R0 707 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 MIOSQ9NXC5 875 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 ZDHHC7Q9NXF8 308 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 RGL1Q9NZL6 768 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 WRAP73Q9P2S5 460 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 ADAM28Q9UKQ2 775 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 KCNJ14Q9UNX9 436 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 SF3B1O75533 1304 aaKnown RBP eCLIP7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CACNA1AO00555 2505 aa7.43□□□□□ -1.22
RTFDC1-206ENST00000477485 CYP3A7-CYP3A51PA0A087WV96 503 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 KANSL1LA0AUZ9 987 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 LRRIQ4A6NIV6 560 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 ZBTB39O15060 712 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 ASAP2O43150 1006 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 ZMYND10O75800 440 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 BAG4O95429 457 aaKnown RBP7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 C8AP07357 584 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 CD72P21854 359 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 CYP3A7P24462 503 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 AXLP30530 894 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 DSC1Q08554 894 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 GRIK3Q13003 919 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 PPP2R5CQ13362 524 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 HSP90AA2PQ14568 343 aaPredicted RBP7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 MXD4Q14582 209 aaPredicted RBP7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 MLF2Q15773 248 aaPredicted RBP7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 PSMD5Q16401 504 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 RTP2Q5QGT7 225 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 FAM171A1Q5VUB5 890 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 PPP4R3AQ6IN85 833 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 MTSS1LQ765P7 747 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 MAEAQ7L5Y9 396 aa7.42□□□□□ -1.22
RTFDC1-206ENST00000477485 NEK8Q86SG6 692 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms